C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: zinc finger, C3HC-type containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360708 ZC3HC1-002 ENSG00000091732 9606 - 7:130018292-130051374 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyOvaryENST00000360708
Transcript ID Breast Heart Kidney Ovary
ENST00000360708 0.309±0.00 0.563±0.00 1.579±1.17 0.659±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DZ CIL_0004DZ_0001 CGP 7:129830732-130051451
CIL_0004E3 CIL_0004E3_0001 CGP 7:130018286-130135720

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0007067 IEA mitotic nuclear division
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0019901 IPI protein kinase binding
GO:0031965 IDA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115184 Zc3hc1-003 protein_coding Mus_musculus 0 1291
ENSMUST00000102992 Zc3hc1-001 protein_coding Mus_musculus 0 981
ENSMUST00000080812 Zc3hc1-002 protein_coding Mus_musculus 0 981
ENSMUST00000152391 Zc3hc1-004 protein_coding Mus_musculus 0 737
ENSMUST00000136255 Zc3hc1-010 nonsense_mediated_decay Mus_musculus 0 588
ENSMUST00000138983 Zc3hc1-009 retained_intron Mus_musculus 0 222

Loading