C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cortactin binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152499 Cttnbp2-005 ENSMUSG00000000416 10090 - 6:18366478-18428231 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyLiverOvaryPlacentaENSMUST00000152499
Transcript ID Adipose Brain Kidney Liver Ovary Placenta
ENSMUST00000152499 0.059±0.00 2.894±0.48 0.518±0.00 0.043±0.02 0.476±0.00 0.112±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005U6 CIL_0005U6_0003 CGP 6:18170687-18514869
CIL_0003QX CIL_0003QX_0002 CGP 6:18366478-18855751

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000160373 CTTNBP2-001 protein_coding Homo_sapiens 0 3668
ENST00000416239 CTTNBP2-004 protein_coding Homo_sapiens 0 326
ENST00000435233 CTTNBP2-009 protein_coding Homo_sapiens 0 388
ENST00000441556 CTTNBP2-012 nonsense_mediated_decay Homo_sapiens 0 3596
ENST00000445366 CTTNBP2-010 nonsense_mediated_decay Homo_sapiens 0 590
ENST00000446636 CTTNBP2-011 protein_coding Homo_sapiens 0 3663
ENST00000467088 CTTNBP2-008 retained_intron Homo_sapiens 0 496

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