C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TCF3 (E2A) fusion partner
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153143 Tfpt-003 ENSMUSG00000006335 10090 - 7:3624594-3629579 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000153143
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000153143 22.871±0.00 29.969±0.00 19.780±0.88 18.040±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NN CIL_0005NN_0002 CGP 7:3617373-3629929
CIL_0005O3 CIL_0005O3_0002 CGP 7:3620324-3642486

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000391757 TFPT-005 protein_coding Homo_sapiens 0 449
ENST00000391758 TFPT-002 protein_coding Homo_sapiens 0 451
ENST00000391759 TFPT-003 protein_coding Homo_sapiens 0 449
ENST00000420715 TFPT-006 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000610802 TFPT-006 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000611344 TFPT-002 protein_coding Homo_sapiens 0 451
ENST00000611514 TFPT-208 protein_coding Homo_sapiens 0 449
ENST00000611935 TFPT-204 protein_coding Homo_sapiens 0 449
ENST00000614788 TFPT-201 protein_coding Homo_sapiens 0 449
ENST00000615094 TFPT-004 protein_coding Homo_sapiens 0 449
ENST00000615534 TFPT-202 protein_coding Homo_sapiens 0 449
ENST00000615620 TFPT-205 protein_coding Homo_sapiens 0 449
ENST00000616277 TFPT-206 protein_coding Homo_sapiens 0 449
ENST00000616798 TFPT-003 protein_coding Homo_sapiens 0 449
ENST00000617348 TFPT-203 protein_coding Homo_sapiens 0 449
ENST00000619581 TFPT-207 protein_coding Homo_sapiens 0 449
ENST00000621091 TFPT-005 protein_coding Homo_sapiens 0 449

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