C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | transient receptor potential cation channel, subfamily M, member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000153421  |
Trpm1-002 |
ENSMUSG00000030523 |
10090 | + |
7:64153845-64226739  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00081G | CIL_00081G_0002 | VISTA | 7:63656077-64260826 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005261 | IDA | cation channel activity |
| GO:0006812 | IDA | cation transport |
| GO:0007165 | IGI | signal transduction |
| GO:0007216 | IEA | G-protein coupled glutamate receptor signaling pathway |
| GO:0016021 | IEA | integral component of membrane |
| GO:0035841 | IDA | new growing cell tip |
| GO:0046548 | IMP | retinal rod cell development |
| GO:0071482 | IMP | cellular response to light stimulus |
| GO:0098655 | IEA:IDA | cation transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000256552
|
TRPM1-004 | protein_coding | Homo_sapiens | 0 | 1419 |
|
ENST00000397795
|
TRPM1-001 | protein_coding | Homo_sapiens | 0 | 1421 |
|
ENST00000542188
|
TRPM1-201 | protein_coding | Homo_sapiens | 0 | 1483 |
|
ENST00000558070
|
TRPM1-009 | retained_intron | Homo_sapiens | 0 | 361 |
|
ENST00000558445
|
TRPM1-008 | protein_coding | Homo_sapiens | 0 | 1480 |
|
ENST00000558768
|
TRPM1-007 | protein_coding | Homo_sapiens | 0 | 1074 |
|
ENST00000560658
|
TRPM1-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 1061 |
|
ENST00000560801
|
TRPM1-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 797 |
|
ENST00000611448
|
TRPM1-202 | protein_coding | Homo_sapiens | 0 | 1489 |
|
ENST00000615583
|
TRPM1-203 | protein_coding | Homo_sapiens | 0 | 1424 |
|
ENST00000617515
|
TRPM1-204 | protein_coding | Homo_sapiens | 0 | 1426 |
|
ENST00000618210
|
TRPM1-205 | protein_coding | Homo_sapiens | 0 | 1334 |
|
ENST00000621076
|
TRPM1-206 | protein_coding | Homo_sapiens | 0 | 797 |
