C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transient receptor potential cation channel, subfamily M, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558070 TRPM1-009 ENSG00000134160 9606 - 15:31060465-31062751 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonPlacentaENST00000558070
Transcript ID Breast Colon Placenta
ENST00000558070 0.052±0.00 0.083±0.00 0.104±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141574 Trpm1-006 retained_intron Mus_musculus 0 387
ENSMUST00000177102 Trpm1-201 protein_coding Mus_musculus 0 361
ENSMUST00000107515 Trpm1-009 protein_coding Mus_musculus 0 361
ENSMUST00000032737 Trpm1-008 protein_coding Mus_musculus 0 361
ENSMUST00000107519 Trpm1-005 protein_coding Mus_musculus 0 361
ENSMUST00000107516 Trpm1-007 retained_intron Mus_musculus 0 361
ENSMUST00000107525 Trpm1-001 protein_coding Mus_musculus 0 361
ENSMUST00000153421 Trpm1-002 nonsense_mediated_decay Mus_musculus 0 361
ENSMUST00000085222 Trpm1-003 protein_coding Mus_musculus 0 361

Loading