| Transcript ID | Adipose | Ovary | Placenta |
|---|---|---|---|
| ENST00000560658 | 0.028±0.00 | 0.021±0.00 | 0.016±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | transient receptor potential cation channel, subfamily M, member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000560658  |
TRPM1-005 |
ENSG00000134160 |
9606 | - |
15:31060235-31101706  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005262 | IDA | calcium channel activity |
| GO:0005886 | TAS | plasma membrane |
| GO:0005887 | TAS | integral component of plasma membrane |
| GO:0006810 | TAS | transport |
| GO:0007216 | IMP | G-protein coupled glutamate receptor signaling pathway |
| GO:0007601 | IMP | visual perception |
| GO:0034220 | TAS | ion transmembrane transport |
| GO:0055085 | TAS | transmembrane transport |
| GO:0060402 | IDA | calcium ion transport into cytosol |
| GO:0070588 | TAS | calcium ion transmembrane transport |
| GO:0071482 | IMP | cellular response to light stimulus |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000177102
|
Trpm1-201 | protein_coding | Mus_musculus | 0 | 1070 |
|
ENSMUST00000032737
|
Trpm1-008 | protein_coding | Mus_musculus | 0 | 1070 |
|
ENSMUST00000107519
|
Trpm1-005 | protein_coding | Mus_musculus | 0 | 1070 |
|
ENSMUST00000107516
|
Trpm1-007 | retained_intron | Mus_musculus | 0 | 1070 |
|
ENSMUST00000141574
|
Trpm1-006 | retained_intron | Mus_musculus | 0 | 1070 |
|
ENSMUST00000107525
|
Trpm1-001 | protein_coding | Mus_musculus | 0 | 1061 |
|
ENSMUST00000153421
|
Trpm1-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1061 |
|
ENSMUST00000085222
|
Trpm1-003 | protein_coding | Mus_musculus | 0 | 1061 |
|
ENSMUST00000107515
|
Trpm1-009 | protein_coding | Mus_musculus | 0 | 798 |
|
ENSMUST00000176392
|
Trpm1-018 | processed_transcript | Mus_musculus | 0 | 331 |
