C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA binding motif, single stranded interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153555 Rbms1-003 ENSMUSG00000026970 10090 - 2:60755416-60780941 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastTestisENSMUST00000153555
Transcript ID Breast Testis
ENSMUST00000153555 18.248±0.00 24.292±8.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TW CIL_0005TW_0002 CGP 2:60598292-60963192
CIL_0005KZ CIL_0005KZ_0002 CGP 2:60750193-61654171

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000348849 RBMS1-001 protein_coding Homo_sapiens 0 440
ENST00000392753 RBMS1-201 protein_coding Homo_sapiens 0 440
ENST00000409075 RBMS1-006 protein_coding Homo_sapiens 0 481
ENST00000409289 RBMS1-009 protein_coding Homo_sapiens 0 481
ENST00000409972 RBMS1-007 protein_coding Homo_sapiens 0 481
ENST00000417216 RBMS1P1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000474820 RBMS1-002 processed_transcript Homo_sapiens 0 811
ENST00000477965 RBMS1-004 retained_intron Homo_sapiens 0 303
ENST00000490637 RBMS1-008 retained_intron Homo_sapiens 0 303
ENST00000491781 RBMS1-005 retained_intron Homo_sapiens 0 433

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