C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153563 Galnt3-002 ENSMUSG00000026994 10090 - 2:66095641-66102483 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartLiverMuscleENSMUST00000153563
Transcript ID Adrenal Breast Heart Liver Muscle
ENSMUST00000153563 0.448±0.19 0.902±0.00 0.157±0.09 0.105±0.00 0.107±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087V CIL_00087V_0002 VISTA 2:65692128-66294633
CIL_0003S2 CIL_0003S2_0003 CGP 2:65845767-66124994
CIL_0006CI CIL_0006CI_0002 CGP 2:66082766-66256617

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392701 GALNT3-001 protein_coding Homo_sapiens 0 501
ENST00000409882 GALNT3-010 protein_coding Homo_sapiens 0 324
ENST00000412248 GALNT3-004 protein_coding Homo_sapiens 0 501
ENST00000437849 GALNT3-007 nonsense_mediated_decay Homo_sapiens 0 324
ENST00000463254 GALNT3-008 retained_intron Homo_sapiens 0 435

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