C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003S2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079741-ENSDARG00000063724 CGP 7955 9:50810783-50853337
GeneTranscriptPositionBiotype
ENSDARG00000063724 (GALNT3)
Uncharacterized protein 		ENSDART00000093382 (GALNT3-201) 50837292-50853337 protein_coding
ENSDARG00000079741 (CSRNP3)
cysteine-serine-rich nuclear protein 3 		ENSDART00000110069 (CSRNP3-201) 50810783-50825087 protein_coding
CIL_0003S2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178662-ENSG00000115339 CGP 9606 2:165469647-165794682
GeneTranscriptPositionBiotype
ENSG00000115339 (GALNT3)
polypeptide N-acetylgalactosaminyltransferase 3 		ENST00000392701 (GALNT3-001) 165747591-165794682 protein_coding
ENST00000409882 (GALNT3-010) 165747803-165761907 protein_coding
ENST00000412248 (GALNT3-004) 165757047-165794659 protein_coding
ENST00000414977 (GALNT3-002) 165770529-165793879 protein_coding
ENST00000422973 (GALNT3-003) 165770625-165794247 protein_coding
ENST00000431484 (GALNT3-005) 165770431-165794650 protein_coding
ENST00000437849 (GALNT3-007) 165757068-165764959 nonsense_mediated_decay
ENST00000447156 (GALNT3-006) 165770666-165771691 protein_coding
ENST00000463254 (GALNT3-008) 165758618-165762025 retained_intron
ENSG00000178662 (CSRNP3)
cysteine-serine-rich nuclear protein 3 		ENST00000314499 (CSRNP3-201) 165469647-165689407 protein_coding
ENST00000342316 (CSRNP3-001) 165572339-165689407 protein_coding
ENST00000409420 (CSRNP3-006) 165574109-165680194 protein_coding
ENST00000409664 (CSRNP3-002) 165469698-165676319 protein_coding
ENST00000421875 (CSRNP3-003) 165469647-165679307 protein_coding
ENST00000464503 (CSRNP3-005) 165469706-165566981 processed_transcript
CIL_0003S2_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044647-ENSMUSG00000026994 CGP 10090 2:65845767-66124994
GeneTranscriptPositionBiotype
ENSMUSG00000026994 (Galnt3)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 		ENSMUST00000028378 (Galnt3-001) 66082766-66124994 protein_coding
ENSMUST00000150793 (Galnt3-003) 66091162-66094071 processed_transcript
ENSMUST00000153563 (Galnt3-002) 66095641-66102483 processed_transcript
ENSMUST00000155453 (Galnt3-004) 66084086-66095224 processed_transcript
ENSMUSG00000044647 (Csrnp3)
cysteine-serine-rich nuclear protein 3 		ENSMUST00000053910 (Csrnp3-002) 65845842-66025606 protein_coding
ENSMUST00000112394 (Csrnp3-004) 65948949-66023053 protein_coding
ENSMUST00000112397 (Csrnp3-005) 65845855-66023279 nonsense_mediated_decay
ENSMUST00000122912 (Csrnp3-001) 65845767-66031546 protein_coding
ENSMUST00000129133 (Csrnp3-006) 65860597-65949439 retained_intron
ENSMUST00000139896 (Csrnp3-003) 65845845-65878818 retained_intron
ENSMUST00000145598 (Csrnp3-008) 65931865-66023484 protein_coding
ENSMUST00000176109 (Csrnp3-007) 65930137-66023946 protein_coding
ENSMUSG00000085160 (Gm13617)
predicted gene 13617 		ENSMUST00000155350 (Gm13617-001) 65944299-65954070 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003S2_0001ENSDARG00000063724ENSDART00000093382ENSDARG00000079741ENSDART00000110069CIL_0003S2_0002ENSG00000115339ENST00000392701ENST00000409882ENST00000412248ENST00000414977ENST00000422973ENST00000431484ENST00000437849ENST00000447156ENST00000463254ENSG00000178662ENST00000314499ENST00000342316ENST00000409420ENST00000409664ENST00000421875ENST00000464503CIL_0003S2_0003ENSMUSG00000026994ENSMUST00000028378ENSMUST00000150793ENSMUST00000153563ENSMUST00000155453ENSMUSG00000044647ENSMUST00000053910ENSMUST00000112394ENSMUST00000112397ENSMUST00000122912ENSMUST00000129133ENSMUST00000139896ENSMUST00000145598ENSMUST00000176109ENSMUSG00000085160ENSMUST00000155350
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003S2_0001ENSDARG00000063724ENSDART00000093382ENSDARG00000079741ENSDART00000110069CIL_0003S2_0002ENSG00000115339ENST00000392701ENST00000409882ENST00000412248ENST00000422973ENST00000437849ENSG00000178662ENST00000314499ENST00000342316ENST00000409420ENST00000421875CIL_0003S2_0003ENSMUSG00000026994ENSMUST00000028378ENSMUST00000153563ENSMUST00000155453ENSMUSG00000044647ENSMUST00000053910ENSMUST00000112394ENSMUST00000112397ENSMUST00000122912ENSMUST00000129133ENSMUST00000145598ENSMUST00000176109ENSMUSG00000085160ENSMUST00000155350
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063724 ENSDART00000093382 N/A N/A N/A 0.669±0.58 N/A N/A 0.384±0.34 0.133±0.16 0.051±0.00 N/A 0.267±0.00 N/A N/A N/A
ENSDARG00000079741 ENSDART00000110069 N/A N/A N/A N/A N/A N/A 0.060±0.00 0.215±0.00 N/A N/A 0.343±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115339 ENST00000392701 0.095±0.00 N/A 0.395±0.00 0.083±0.01 0.436±0.00 1.272±0.79 0.024±0.00 0.552±0.42 0.324±0.25 0.962±0.10 N/A 2.896±2.75 1.248±0.63 3.518±0.00
ENST00000409882 0.107±0.00 0.340±0.00 N/A 0.697±0.00 1.878±0.65 4.168±1.03 N/A 2.384±0.00 0.142±0.08 2.212±0.00 N/A 5.608±5.19 1.726±0.81 5.572±3.30
ENST00000412248 N/A N/A 0.486±0.00 N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A 0.546±0.00 3.115±0.00
ENST00000414977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A
ENST00000431484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437849 N/A N/A N/A N/A 4.560±0.00 4.100±0.00 0.267±0.00 0.543±0.00 N/A N/A N/A N/A N/A N/A
ENST00000447156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178662 ENST00000314499 N/A 0.223±0.00 N/A 2.366±0.35 0.055±0.00 0.265±0.00 0.301±0.09 0.576±0.00 N/A N/A 0.013±0.01 0.182±0.00 N/A 0.206±0.03
ENST00000342316 N/A N/A N/A 11.467±0.00 0.407±0.00 N/A 0.092±0.00 N/A 1.820±0.00 N/A 0.003±0.00 0.234±0.00 0.035±0.01 N/A
ENST00000409420 N/A N/A N/A N/A N/A 0.338±0.00 0.404±0.00 N/A N/A N/A N/A 1.122±0.00 0.040±0.00 0.165±0.00
ENST00000409664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421875 N/A N/A N/A N/A N/A N/A N/A N/A 1.786±0.00 0.188±0.00 0.053±0.00 0.125±0.00 N/A N/A
ENST00000464503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026994 ENSMUST00000028378 0.180±0.17 0.046±0.03 1.040±0.16 0.127±0.02 0.474±0.18 5.417±5.40 0.030±0.02 2.223±0.43 0.193±0.10 0.803±0.17 0.061±0.04 0.783±0.09 2.570±0.45 10.848±3.59
ENSMUST00000150793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153563 N/A 0.448±0.19 N/A N/A 0.902±0.00 N/A 0.157±0.09 N/A 0.105±0.00 N/A 0.107±0.00 N/A N/A N/A
ENSMUST00000155453 N/A 0.451±0.00 N/A N/A 1.167±0.45 N/A 0.074±0.03 7.863±1.32 0.216±0.14 N/A 0.089±0.03 1.657±0.44 3.506±0.25 23.693±1.91
ENSMUSG00000044647 ENSMUST00000053910 N/A N/A N/A N/A 0.035±0.00 N/A 0.009±0.00 N/A 0.012±0.00 N/A N/A N/A N/A N/A
ENSMUST00000112394 0.954±0.19 0.107±0.10 N/A 21.630±0.00 N/A N/A N/A 0.306±0.09 0.050±0.00 N/A N/A 1.305±0.30 0.065±0.01 N/A
ENSMUST00000112397 N/A 0.074±0.06 N/A N/A N/A 0.041±0.00 0.066±0.00 N/A N/A N/A N/A N/A N/A 5.254±1.20
ENSMUST00000122912 0.173±0.12 0.024±0.01 0.006±0.00 2.026±0.64 0.010±0.00 0.035±0.01 0.012±0.00 N/A 0.009±0.00 0.016±0.01 0.002±0.00 0.560±0.11 0.002±0.00 N/A
ENSMUST00000129133 N/A 0.249±0.00 N/A N/A N/A N/A 0.192±0.00 N/A 0.173±0.00 N/A N/A N/A N/A N/A
ENSMUST00000139896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145598 N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A N/A 0.667±0.15
ENSMUST00000176109 N/A N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A 0.372±0.15 N/A N/A
ENSMUSG00000085160 ENSMUST00000155350 N/A N/A N/A 0.103±0.02 N/A N/A 0.081±0.03 0.069±0.00 N/A N/A N/A N/A N/A N/A

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