C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006CI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115339-ENSG00000123607 CGP 9606 2:165747591-165953843
GeneTranscriptPositionBiotype
ENSG00000115339 (GALNT3)
polypeptide N-acetylgalactosaminyltransferase 3 		ENST00000392701 (GALNT3-001) 165747591-165794682 protein_coding
ENST00000409882 (GALNT3-010) 165747803-165761907 protein_coding
ENST00000412248 (GALNT3-004) 165757047-165794659 protein_coding
ENST00000414977 (GALNT3-002) 165770529-165793879 protein_coding
ENST00000422973 (GALNT3-003) 165770625-165794247 protein_coding
ENST00000431484 (GALNT3-005) 165770431-165794650 protein_coding
ENST00000437849 (GALNT3-007) 165757068-165764959 nonsense_mediated_decay
ENST00000447156 (GALNT3-006) 165770666-165771691 protein_coding
ENST00000463254 (GALNT3-008) 165758618-165762025 retained_intron
ENSG00000123607 (TTC21B)
tetratricopeptide repeat domain 21B 		ENST00000243344 (TTC21B-001) 165873362-165953843 protein_coding
ENST00000392695 (TTC21B-003) 165857478-165890641 nonsense_mediated_decay
ENST00000464374 (TTC21B-006) 165928717-165953745 retained_intron
ENST00000476227 (TTC21B-007) 165949111-165953811 retained_intron
ENST00000484129 (TTC21B-008) 165898627-165907720 retained_intron
ENST00000486672 (TTC21B-004) 165857475-165871211 retained_intron
ENST00000489714 (TTC21B-005) 165857475-165870991 processed_transcript
ENST00000497425 (TTC21B-009) 165879634-165883955 processed_transcript
ENSG00000229195 (AC009495.4)
 ENST00000428888 (AC009495.4-001) 165794857-165846091 lincRNA
ENSG00000232411 (AC009495.3)
 ENST00000457108 (AC009495.3-001) 165833048-165839098 lincRNA
ENSG00000235192 (AC009495.2)
 ENST00000425688 (AC009495.2-001) 165794851-165810010 lincRNA
CIL_0006CI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026994-ENSMUSG00000034848 CGP 10090 2:66082766-66256617
GeneTranscriptPositionBiotype
ENSMUSG00000026994 (Galnt3)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 		ENSMUST00000028378 (Galnt3-001) 66082766-66124994 protein_coding
ENSMUST00000150793 (Galnt3-003) 66091162-66094071 processed_transcript
ENSMUST00000153563 (Galnt3-002) 66095641-66102483 processed_transcript
ENSMUST00000155453 (Galnt3-004) 66084086-66095224 processed_transcript
ENSMUSG00000034848 (Ttc21b)
tetratricopeptide repeat domain 21B 		ENSMUST00000102718 (Ttc21b-001) 66184327-66256617 protein_coding
ENSMUST00000125446 (Ttc21b-003) 66184643-66256592 protein_coding
ENSMUST00000131503 (Ttc21b-002) 66231116-66249410 retained_intron
ENSMUST00000169968 (Ttc21b-004) 66218015-66235138 retained_intron
ENSMUSG00000086671 (Gm13618)
predicted gene 13618 		ENSMUST00000128859 (Gm13618-001) 66187836-66192813 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006CI_0001ENSG00000115339ENST00000392701ENST00000409882ENST00000412248ENST00000414977ENST00000422973ENST00000431484ENST00000437849ENST00000447156ENST00000463254ENSG00000123607ENST00000243344ENST00000392695ENST00000464374ENST00000476227ENST00000484129ENST00000486672ENST00000489714ENST00000497425ENSG00000229195ENST00000428888ENSG00000232411ENST00000457108ENSG00000235192ENST00000425688CIL_0006CI_0002ENSMUSG00000026994ENSMUST00000028378ENSMUST00000150793ENSMUST00000153563ENSMUST00000155453ENSMUSG00000034848ENSMUST00000102718ENSMUST00000125446ENSMUST00000131503ENSMUST00000169968ENSMUSG00000086671ENSMUST00000128859
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006CI_0001ENSG00000115339ENST00000392701ENST00000409882ENST00000412248ENST00000422973ENST00000437849ENSG00000123607ENST00000243344ENST00000392695ENST00000484129ENST00000486672ENSG00000229195ENST00000428888ENSG00000232411ENST00000457108ENSG00000235192ENST00000425688CIL_0006CI_0002ENSMUSG00000026994ENSMUST00000028378ENSMUST00000153563ENSMUST00000155453ENSMUSG00000034848ENSMUST00000102718ENSMUST00000125446ENSMUST00000169968ENSMUSG00000086671ENSMUST00000128859
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115339 ENST00000392701 0.095±0.00 N/A 0.395±0.00 0.083±0.01 0.436±0.00 1.272±0.79 0.024±0.00 0.552±0.42 0.324±0.25 0.962±0.10 N/A 2.896±2.75 1.248±0.63 3.518±0.00
ENST00000409882 0.107±0.00 0.340±0.00 N/A 0.697±0.00 1.878±0.65 4.168±1.03 N/A 2.384±0.00 0.142±0.08 2.212±0.00 N/A 5.608±5.19 1.726±0.81 5.572±3.30
ENST00000412248 N/A N/A 0.486±0.00 N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A 0.546±0.00 3.115±0.00
ENST00000414977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A
ENST00000431484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437849 N/A N/A N/A N/A 4.560±0.00 4.100±0.00 0.267±0.00 0.543±0.00 N/A N/A N/A N/A N/A N/A
ENST00000447156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000123607 ENST00000243344 1.314±0.00 1.809±0.00 1.541±0.00 1.651±0.24 1.724±0.28 1.741±0.51 1.407±0.00 1.804±0.75 1.546±0.88 1.563±0.24 1.927±0.00 1.849±0.64 1.256±0.46 3.793±0.07
ENST00000392695 N/A N/A N/A 0.992±0.00 1.554±0.00 1.689±0.00 N/A N/A N/A 1.108±0.00 1.199±0.00 2.166±0.58 N/A 3.598±0.00
ENST00000464374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.969±0.00 N/A
ENST00000486672 N/A N/A 17.795±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229195 ENST00000428888 N/A 0.072±0.00 N/A 0.073±0.00 0.519±0.00 N/A N/A 0.207±0.00 N/A N/A N/A 0.186±0.00 0.167±0.08 0.096±0.00
ENSG00000232411 ENST00000457108 N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A 0.235±0.00 N/A 0.169±0.00 0.065±0.00 0.067±0.00
ENSG00000235192 ENST00000425688 N/A 0.072±0.00 0.599±0.00 0.219±0.00 N/A N/A N/A N/A 0.564±0.00 0.096±0.00 N/A 0.096±0.04 0.055±0.00 0.243±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026994 ENSMUST00000028378 0.180±0.17 0.046±0.03 1.040±0.16 0.127±0.02 0.474±0.18 5.417±5.40 0.030±0.02 2.223±0.43 0.193±0.10 0.803±0.17 0.061±0.04 0.783±0.09 2.570±0.45 10.848±3.59
ENSMUST00000150793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153563 N/A 0.448±0.19 N/A N/A 0.902±0.00 N/A 0.157±0.09 N/A 0.105±0.00 N/A 0.107±0.00 N/A N/A N/A
ENSMUST00000155453 N/A 0.451±0.00 N/A N/A 1.167±0.45 N/A 0.074±0.03 7.863±1.32 0.216±0.14 N/A 0.089±0.03 1.657±0.44 3.506±0.25 23.693±1.91
ENSMUSG00000034848 ENSMUST00000102718 2.756±1.46 2.815±0.53 4.203±0.08 4.497±1.63 2.123±0.25 1.456±0.16 1.710±0.34 4.683±0.24 0.843±0.19 3.058±0.20 0.530±0.14 3.595±1.38 1.117±0.84 23.344±1.91
ENSMUST00000125446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.156±0.05 2.020±1.07 0.546±0.27 23.271±0.00
ENSMUST00000131503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169968 N/A N/A N/A 0.613±0.10 N/A N/A N/A N/A N/A N/A N/A 0.435±0.08 N/A N/A
ENSMUSG00000086671 ENSMUST00000128859 N/A N/A 0.037±0.00 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A 0.179±0.00 0.244±0.00 0.528±0.37

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