C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 188, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153690 Fam188a-011 ENSMUSG00000026767 10090 - 2:12400044-12410204 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENSMUST00000153690
Transcript ID Placenta Testis
ENSMUST00000153690 8.514±0.00 2.885±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088I CIL_00088I_0002 VISTA 2:11765185-12368019
CIL_0002HM CIL_0002HM_0002 CGP 2:12106632-12419469
CIL_0002HH CIL_0002HH_0002 CGP 2:12347263-13003453

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277632 FAM188A-001 protein_coding Homo_sapiens 0 656
ENST00000418767 FAM188A-006 protein_coding Homo_sapiens 6e-25 119
ENST00000436829 FAM188A-005 protein_coding Homo_sapiens 8e-32 141
ENST00000477891 FAM188A-002 processed_transcript Homo_sapiens 0 422

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