C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rap guanine nucleotide exchange factor (GEF) 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153887 Rapgef4-006 ENSMUSG00000049044 10090 + 2:72179693-72257472 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverMuscleOvaryPlacentaTestisENSMUST00000153887
Transcript ID Adrenal Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000153887 13.479±1.77 16.229±15.33 15.688±12.78 0.331±0.08 5.242±3.69 0.315±0.00 0.656±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KA CIL_0004KA_0002 CGP 2:71873224-72257474
CIL_0003IJ CIL_0003IJ_0003 CGP 2:71981240-72442610

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397081 RAPGEF4-001 protein_coding Homo_sapiens 0 3181
ENST00000397085 RAPGEF4-003 protein_coding Homo_sapiens 0 760
ENST00000397087 RAPGEF4-004 protein_coding Homo_sapiens 0 3181
ENST00000409036 RAPGEF4-011 protein_coding Homo_sapiens 0 2483
ENST00000459852 RAPGEF4-008 processed_transcript Homo_sapiens 0 651
ENST00000473043 RAPGEF4-010 processed_transcript Homo_sapiens 0 974
ENST00000484645 RAPGEF4-002 retained_intron Homo_sapiens 0 409
ENST00000535187 RAPGEF4-201 protein_coding Homo_sapiens 0 3181
ENST00000538974 RAPGEF4-202 protein_coding Homo_sapiens 0 3181
ENST00000540783 RAPGEF4-203 protein_coding Homo_sapiens 0 3181

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