Institute of Cardiovascular Regeneration Webtool Repository

Region Summary

Source ID	Type	Tax ID	Position
ENSG00000152256-ENSG00000091428	CGP	9606	2:172555373-173052893
Gene	Transcript	Position	Biotype
ENSG00000091428 (RAPGEF4) Rap guanine nucleotide exchange factor (GEF) 4	ENST00000397081 (RAPGEF4-001)	172735841-173052887	protein_coding
	ENST00000397085 (RAPGEF4-003)	173026626-173036795	protein_coding
	ENST00000397087 (RAPGEF4-004)	172821575-173052893	protein_coding
	ENST00000409036 (RAPGEF4-011)	172735967-173052893	protein_coding
	ENST00000459852 (RAPGEF4-008)	172967109-172988273	processed_transcript
	ENST00000464976 (RAPGEF4-009)	172744138-172814740	processed_transcript
	ENST00000466030 (RAPGEF4-006)	172928152-172967397	processed_transcript
	ENST00000473003 (RAPGEF4-013)	172860038-172965638	processed_transcript
	ENST00000473043 (RAPGEF4-010)	172889801-172990925	processed_transcript
	ENST00000473182 (RAPGEF4-007)	172965141-172967316	retained_intron
	ENST00000484331 (RAPGEF4-012)	172735274-172917837	processed_transcript
	ENST00000484645 (RAPGEF4-002)	173048128-173051954	retained_intron
	ENST00000535187 (RAPGEF4-201)	172928205-173052887	protein_coding
	ENST00000538974 (RAPGEF4-202)	172860038-173052887	protein_coding
	ENST00000540783 (RAPGEF4-203)	172860038-173052887	protein_coding
ENSG00000152256 (PDK1) pyruvate dehydrogenase kinase, isozyme 1	ENST00000282077 (PDK1-001)	172555969-172608669	protein_coding
	ENST00000392571 (PDK1-003)	172556007-172595969	protein_coding
	ENST00000410055 (PDK1-002)	172556051-172599137	protein_coding
	ENST00000416991 (PDK1-008)	172556313-172570812	protein_coding
	ENST00000431718 (PDK1-006)	172556102-172570820	nonsense_mediated_decay
	ENST00000436490 (PDK1-005)	172555627-172564687	nonsense_mediated_decay
	ENST00000439519 (PDK1-007)	172556565-172565073	protein_coding
	ENST00000443353 (PDK1-004)	172555373-172565073	protein_coding
	ENST00000466437 (PDK1-009)	172570585-172595962	retained_intron
ENSG00000230104 (AC018712.2)	ENST00000455767 (AC018712.2-001)	172674212-172674898	processed_pseudogene
ENSG00000232292 (ALDH7A1P2) aldehyde dehydrogenase 7 family, member A1 pseudogene 2	ENST00000456501 (ALDH7A1P2-001)	172893763-172894383	processed_pseudogene

CIL_0004KA_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSMUSG00000006494-ENSMUSG00000049044	CGP	10090	2:71873224-72257474
Gene	Transcript	Position	Biotype
ENSMUSG00000006494 (Pdk1) pyruvate dehydrogenase kinase, isoenzyme 1	ENSMUST00000006669 (Pdk1-001)	71873224-71903858	protein_coding
	ENSMUST00000129427 (Pdk1-008)	71887418-71896493	processed_transcript
	ENSMUST00000129887 (Pdk1-005)	71875079-71883607	processed_transcript
	ENSMUST00000134362 (Pdk1-007)	71873326-71886312	processed_transcript
	ENSMUST00000148249 (Pdk1-006)	71873551-71884184	processed_transcript
	ENSMUST00000151358 (Pdk1-003)	71873743-71888952	processed_transcript
	ENSMUST00000152696 (Pdk1-004)	71873320-71883932	processed_transcript
	ENSMUST00000156036 (Pdk1-002)	71873346-71901986	processed_transcript
ENSMUSG00000049044 (Rapgef4) Rap guanine nucleotide exchange factor (GEF) 4	ENSMUST00000028525 (Rapgef4-005)	72054604-72257472	protein_coding
	ENSMUST00000090826 (Rapgef4-001)	71981240-72257474	protein_coding
	ENSMUST00000102698 (Rapgef4-003)	71981287-72256376	protein_coding
	ENSMUST00000122975 (Rapgef4-009)	72140711-72196261	processed_transcript
	ENSMUST00000124004 (Rapgef4-008)	72054985-72141477	processed_transcript
	ENSMUST00000146970 (Rapgef4-011)	72242294-72256655	processed_transcript
	ENSMUST00000149421 (Rapgef4-007)	71981247-72034405	processed_transcript
	ENSMUST00000150234 (Rapgef4-002)	71981259-72141301	processed_transcript
	ENSMUST00000151236 (Rapgef4-004)	72140728-72163386	processed_transcript
	ENSMUST00000153887 (Rapgef4-006)	72179693-72257472	processed_transcript
	ENSMUST00000156031 (Rapgef4-010)	72198799-72208437	processed_transcript
ENSMUSG00000085001 (Rapgef4os2) Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 2	ENSMUST00000128165 (Rapgef4os2-001)	72224688-72232302	antisense
ENSMUSG00000085439 (Rapgef4os1) Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 1	ENSMUST00000126462 (Rapgef4os1-001)	72097603-72148796	antisense
ENSMUSG00000086231 (Rapgef4os3) Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 3	ENSMUST00000132792 (Rapgef4os3-001)	72244965-72248975	antisense

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000091428

ENST00000397081

0.352±0.00

0.690±0.00

N/A

21.403±15.04

0.847±0.00

0.437±0.00

0.804±0.00

N/A

1.449±0.69

N/A

ENST00000397085

N/A

0.700±0.00

N/A

ENST00000397087

1.216±0.00

0.876±0.00

N/A

0.841±0.00

0.363±0.00

0.140±0.00

0.896±0.00

0.200±0.00

4.589±2.97

0.252±0.00

1.549±0.73

0.222±0.12

0.460±0.00

ENST00000409036

N/A

0.392±0.11

N/A

3.815±0.00

N/A

ENST00000459852

N/A

ENST00000464976

N/A

ENST00000466030

N/A

20.771±0.00

N/A

N/A

N/A

N/A

N/A

N/A

0.519±0.00

N/A

ENST00000535187

N/A

1.490±0.00

N/A

0.945±0.00

N/A

0.910±0.02

0.182±0.00

0.590±0.13

ENST00000538974

N/A

ENST00000540783

N/A

0.382±0.00

0.240±0.04

N/A

ENSG00000152256

ENST00000282077

N/A

1.448±0.00

N/A

0.660±0.02

1.766±0.00

N/A

1.714±0.00

N/A

0.672±0.44

1.975±0.00

N/A

2.122±1.58

N/A

ENST00000392571

N/A

ENST00000410055

N/A

3.182±0.00

N/A

6.729±0.00

N/A

1.344±0.00

N/A

1.796±0.00

3.261±1.46

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENSG00000230104

ENST00000455767

N/A

0.209±0.17

N/A

0.221±0.11

N/A

0.085±0.00

ENSG00000232292

ENST00000456501

N/A

0.040±0.00

N/A

0.112±0.00

N/A

0.452±0.00

N/A

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000006494

ENSMUST00000006669

7.098±2.05

7.442±1.35

7.263±0.44

4.310±1.34

9.831±5.25

6.952±1.14

17.767±4.86

7.289±0.83

8.148±1.14

4.999±0.67

11.331±1.04

4.985±1.41

3.943±1.69

1.189±0.59

ENSMUST00000129427

N/A

ENSMUST00000129887

N/A

ENSMUST00000134362

N/A

20.774±3.12

N/A

20.580±6.66

4.827±0.00

N/A

11.486±0.50

5.013±1.15

N/A

5.829±1.22

N/A

1.565±0.00

ENSMUST00000148249

N/A

ENSMUST00000151358

N/A

6.483±1.40

N/A

ENSMUST00000152696

N/A

95.006±21.48

N/A

13.333±1.27

N/A

9.808±3.07

N/A

ENSMUST00000156036

3.725±0.40

N/A

4.307±0.59

1.104±0.00

4.139±0.83

N/A

1.918±0.23

9.194±2.19

2.297±0.27

N/A

4.574±1.16

5.875±1.98

1.553±0.53

ENSMUSG00000049044

ENSMUST00000028525

0.730±0.16

24.666±10.92

N/A

1.183±0.46

0.824±0.17

0.477±0.13

1.104±0.19

2.248±0.15

N/A

3.649±0.72

0.088±0.03

3.088±1.99

0.701±0.64

0.465±0.00

ENSMUST00000090826

0.687±0.14

6.776±0.00

N/A

3.918±0.79

N/A

0.149±0.00

1.845±0.34

N/A

0.368±0.04

0.626±0.00

N/A

1.420±0.32

0.169±0.08

0.372±0.00

ENSMUST00000102698

N/A

91.311±0.00

N/A

0.147±0.00

4.271±0.00

N/A

0.895±0.00

ENSMUST00000122975

N/A

151.078±0.00

N/A

14.833±0.00

N/A

ENSMUST00000124004

N/A

ENSMUST00000146970

N/A

122.478±30.31

N/A

17.237±0.00

N/A

N/A

N/A

N/A

N/A

13.479±1.77

N/A

16.229±15.33

N/A

15.688±12.78

N/A

0.331±0.08

5.242±3.69

0.315±0.00

0.656±0.19

ENSMUST00000156031

N/A

ENSMUSG00000085001

ENSMUST00000128165

N/A

8.000±0.14

N/A

ENSMUSG00000085439

ENSMUST00000126462

N/A

0.256±0.00

N/A

0.932±1.15

0.259±0.07

N/A

0.195±0.00

0.111±0.04

0.171±0.12

0.132±0.00

0.150±0.04

1.725±1.26

0.495±0.49

0.182±0.04

ENSMUSG00000086231

ENSMUST00000132792

0.227±0.13

0.754±0.03

0.057±0.01

0.260±0.17

0.312±0.20

0.070±0.02

0.096±0.02

0.088±0.03

0.343±0.21

N/A

0.049±0.01

0.697±0.28

0.068±0.04

0.194±0.10

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

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