C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003IJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075924-ENSDARG00000044615 CGP 7955 6:6767670-6881446
GeneTranscriptPositionBiotype
ENSDARG00000044615 (zak)
sterile alpha motif and leucine zipper containing kinase AZK 		ENSDART00000065551 (zak-001) 6841452-6879010 protein_coding
ENSDART00000151393 (zak-002) 6841452-6881446 protein_coding
ENSDARG00000075924 ()
Rap guanine nucleotide exchange factor (GEF) 4 		ENSDART00000111024 () 6767670-6839105 protein_coding
ENSDART00000151694 () 6811043-6817498 retained_intron

Danio rerio Ensembl (Zv9)

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CIL_0003IJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000091428-ENSG00000091436 CGP 9606 2:172735274-173268010
GeneTranscriptPositionBiotype
ENSG00000091428 (RAPGEF4)
Rap guanine nucleotide exchange factor (GEF) 4 		ENST00000397081 (RAPGEF4-001) 172735841-173052887 protein_coding
ENST00000397085 (RAPGEF4-003) 173026626-173036795 protein_coding
ENST00000397087 (RAPGEF4-004) 172821575-173052893 protein_coding
ENST00000409036 (RAPGEF4-011) 172735967-173052893 protein_coding
ENST00000459852 (RAPGEF4-008) 172967109-172988273 processed_transcript
ENST00000464976 (RAPGEF4-009) 172744138-172814740 processed_transcript
ENST00000466030 (RAPGEF4-006) 172928152-172967397 processed_transcript
ENST00000473003 (RAPGEF4-013) 172860038-172965638 processed_transcript
ENST00000473043 (RAPGEF4-010) 172889801-172990925 processed_transcript
ENST00000473182 (RAPGEF4-007) 172965141-172967316 retained_intron
ENST00000484331 (RAPGEF4-012) 172735274-172917837 processed_transcript
ENST00000484645 (RAPGEF4-002) 173048128-173051954 retained_intron
ENST00000535187 (RAPGEF4-201) 172928205-173052887 protein_coding
ENST00000538974 (RAPGEF4-202) 172860038-173052887 protein_coding
ENST00000540783 (RAPGEF4-203) 172860038-173052887 protein_coding
ENSG00000091436 (ZAK)
Mitogen-activated protein kinase kinase kinase MLT 		ENST00000338983 (ZAK-002) 173075842-173227146 protein_coding
ENST00000375213 (ZAK-001) 173075959-173268010 protein_coding
ENST00000409176 (ZAK-003) 173075714-173266783 protein_coding
ENST00000422149 (ZAK-006) 173090619-173187623 protein_coding
ENST00000468408 (ZAK-005) 173075836-173191172 processed_transcript
ENST00000476618 (ZAK-004) 173075868-173212825 retained_intron
ENST00000480606 (ZAK-007) 173160010-173191177 processed_transcript
ENST00000539448 (ZAK-201) 173075435-173222204 protein_coding
ENSG00000232292 (ALDH7A1P2)
aldehyde dehydrogenase 7 family, member A1 pseudogene 2 		ENST00000456501 (ALDH7A1P2-001) 172893763-172894383 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0003IJ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049044-ENSMUSG00000004085 CGP 10090 2:71981240-72442610
GeneTranscriptPositionBiotype
ENSMUSG00000004085 (Zak)
sterile alpha motif and leucine zipper containing kinase AZK 		ENSMUST00000090824 (Zak-001) 72285637-72442610 protein_coding
ENSMUST00000112073 (Zak-003) 72285764-72399237 retained_intron
ENSMUST00000135204 (Zak-005) 72285794-72364843 retained_intron
ENSMUST00000135469 (Zak-002) 72285728-72407502 protein_coding
ENSMUST00000144111 (Zak-006) 72297901-72355622 protein_coding
ENSMUST00000150126 (Zak-004) 72285777-72389839 retained_intron
ENSMUSG00000049044 (Rapgef4)
Rap guanine nucleotide exchange factor (GEF) 4 		ENSMUST00000028525 (Rapgef4-005) 72054604-72257472 protein_coding
ENSMUST00000090826 (Rapgef4-001) 71981240-72257474 protein_coding
ENSMUST00000102698 (Rapgef4-003) 71981287-72256376 protein_coding
ENSMUST00000122975 (Rapgef4-009) 72140711-72196261 processed_transcript
ENSMUST00000124004 (Rapgef4-008) 72054985-72141477 processed_transcript
ENSMUST00000146970 (Rapgef4-011) 72242294-72256655 processed_transcript
ENSMUST00000149421 (Rapgef4-007) 71981247-72034405 processed_transcript
ENSMUST00000150234 (Rapgef4-002) 71981259-72141301 processed_transcript
ENSMUST00000151236 (Rapgef4-004) 72140728-72163386 processed_transcript
ENSMUST00000153887 (Rapgef4-006) 72179693-72257472 processed_transcript
ENSMUST00000156031 (Rapgef4-010) 72198799-72208437 processed_transcript
ENSMUSG00000084261 (Rpl36a-ps4)
ribosomal protein L36A, pseudogene 4 		ENSMUST00000121019 (Rpl36a-ps4-001) 72360247-72360542 processed_pseudogene
ENSMUSG00000085001 (Rapgef4os2)
Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 2 		ENSMUST00000128165 (Rapgef4os2-001) 72224688-72232302 antisense
ENSMUSG00000085439 (Rapgef4os1)
Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 1 		ENSMUST00000126462 (Rapgef4os1-001) 72097603-72148796 antisense
ENSMUSG00000086231 (Rapgef4os3)
Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 3 		ENSMUST00000132792 (Rapgef4os3-001) 72244965-72248975 antisense
ENSMUSG00000088302 (Zakit)
sterile alpha motif and leucine zipper containing kinase AZK, intronic transcript 		ENSMUST00000157677 (Zakit-201) 72327687-72327994 misc_RNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IJ_0001ENSDARG00000044615ENSDART00000065551ENSDART00000151393ENSDARG00000075924ENSDART00000111024ENSDART00000151694CIL_0003IJ_0002ENSG00000091428ENST00000397081ENST00000397085ENST00000397087ENST00000409036ENST00000459852ENST00000464976ENST00000466030ENST00000473003ENST00000473043ENST00000473182ENST00000484331ENST00000484645ENST00000535187ENST00000538974ENST00000540783ENSG00000091436ENST00000338983ENST00000375213ENST00000409176ENST00000422149ENST00000468408ENST00000476618ENST00000480606ENST00000539448ENSG00000232292ENST00000456501CIL_0003IJ_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IJ_0001ENSDARG00000044615ENSDART00000065551ENSDART00000151393ENSDARG00000075924ENSDART00000111024ENSDART00000151694CIL_0003IJ_0002ENSG00000091428ENST00000397081ENST00000397085ENST00000397087ENST00000409036ENST00000466030ENST00000484645ENST00000535187ENST00000540783ENSG00000091436ENST00000338983ENST00000375213ENST00000409176ENSG00000232292ENST00000456501CIL_0003IJ_0003ENSMUSG00000004085ENSMUST00000090824ENSMUST00000135469ENSMUSG00000049044ENSMUST00000028525ENSMUST00000090826ENSMUST00000102698ENSMUST00000122975ENSMUST00000146970ENSMUST00000153887ENSMUSG00000084261ENSMUST00000121019ENSMUSG00000085001ENSMUST00000128165ENSMUSG00000085439ENSMUST00000126462ENSMUSG00000086231ENSMUST00000132792ENSMUSG00000088302ENSMUST00000157677
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044615 ENSDART00000065551 N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A
ENSDART00000151393 N/A N/A N/A 0.656±0.43 N/A N/A 15.977±11.67 3.315±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000075924 ENSDART00000111024 N/A N/A N/A 10.950±0.00 N/A N/A 0.117±0.04 0.290±0.29 N/A N/A 0.562±0.00 N/A N/A N/A
ENSDART00000151694 N/A N/A N/A N/A N/A N/A 3.998±0.21 0.500±0.12 0.103±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091428 ENST00000397081 0.352±0.00 0.690±0.00 N/A 21.403±15.04 0.847±0.00 0.437±0.00 0.804±0.00 N/A N/A N/A N/A 1.449±0.69 N/A N/A
ENST00000397085 N/A N/A N/A N/A N/A N/A N/A N/A 0.700±0.00 N/A N/A N/A N/A N/A
ENST00000397087 1.216±0.00 0.876±0.00 N/A N/A 0.841±0.00 0.363±0.00 0.140±0.00 0.896±0.00 0.200±0.00 4.589±2.97 0.252±0.00 1.549±0.73 0.222±0.12 0.460±0.00
ENST00000409036 N/A N/A N/A N/A N/A N/A 0.392±0.11 N/A N/A N/A N/A 3.815±0.00 N/A N/A
ENST00000459852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.771±0.00 N/A N/A
ENST00000473003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.519±0.00 N/A N/A N/A
ENST00000535187 N/A 1.490±0.00 N/A N/A N/A 0.945±0.00 N/A N/A N/A N/A N/A 0.910±0.02 0.182±0.00 0.590±0.13
ENST00000538974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.382±0.00 0.240±0.04 N/A
ENSG00000091436 ENST00000338983 5.075±0.00 N/A 0.647±0.00 1.474±0.40 14.060±1.91 6.803±0.00 47.438±37.17 1.917±0.68 22.982±0.00 10.472±4.63 55.412±43.94 7.726±4.18 4.941±1.40 3.165±0.00
ENST00000375213 N/A N/A N/A N/A N/A N/A N/A 1.120±0.19 2.373±0.00 N/A N/A N/A 2.403±0.40 N/A
ENST00000409176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.948±0.00 5.214±0.00 N/A
ENST00000422149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232292 ENST00000456501 N/A 0.040±0.00 N/A 0.112±0.00 N/A N/A N/A N/A N/A N/A N/A 0.452±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004085 ENSMUST00000090824 N/A 1.368±0.43 N/A 0.534±0.13 1.572±0.00 1.887±0.11 N/A 1.650±0.03 2.166±0.53 4.175±0.45 N/A 2.415±0.59 0.518±0.11 N/A
ENSMUST00000112073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135469 17.994±2.20 4.057±0.56 26.758±4.13 0.931±0.55 10.599±6.87 8.063±1.40 33.700±7.18 2.292±0.94 2.034±0.63 18.310±1.65 18.624±4.00 9.844±3.95 0.859±0.78 1.382±0.55
ENSMUST00000144111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049044 ENSMUST00000028525 0.730±0.16 24.666±10.92 N/A 1.183±0.46 0.824±0.17 0.477±0.13 1.104±0.19 2.248±0.15 N/A 3.649±0.72 0.088±0.03 3.088±1.99 0.701±0.64 0.465±0.00
ENSMUST00000090826 0.687±0.14 6.776±0.00 N/A 3.918±0.79 N/A 0.149±0.00 1.845±0.34 N/A 0.368±0.04 0.626±0.00 N/A 1.420±0.32 0.169±0.08 0.372±0.00
ENSMUST00000102698 N/A N/A N/A 91.311±0.00 N/A N/A N/A N/A N/A N/A 0.147±0.00 4.271±0.00 N/A 0.895±0.00
ENSMUST00000122975 N/A N/A N/A 151.078±0.00 N/A N/A N/A N/A N/A N/A N/A 14.833±0.00 N/A N/A
ENSMUST00000124004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146970 N/A 122.478±30.31 N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.237±0.00 N/A N/A
ENSMUST00000149421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153887 N/A 13.479±1.77 N/A 16.229±15.33 N/A N/A N/A N/A 15.688±12.78 N/A 0.331±0.08 5.242±3.69 0.315±0.00 0.656±0.19
ENSMUST00000156031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084261 ENSMUST00000121019 0.572±0.00 N/A 0.241±0.00 N/A N/A N/A N/A N/A 0.065±0.01 N/A N/A N/A N/A N/A
ENSMUSG00000085001 ENSMUST00000128165 N/A N/A 8.000±0.14 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085439 ENSMUST00000126462 N/A 0.256±0.00 N/A 0.932±1.15 0.259±0.07 N/A 0.195±0.00 0.111±0.04 0.171±0.12 0.132±0.00 0.150±0.04 1.725±1.26 0.495±0.49 0.182±0.04
ENSMUSG00000086231 ENSMUST00000132792 0.227±0.13 0.754±0.03 0.057±0.01 0.260±0.17 0.312±0.20 0.070±0.02 0.096±0.02 0.088±0.03 0.343±0.21 N/A 0.049±0.01 0.697±0.28 0.068±0.04 0.194±0.10
ENSMUSG00000088302 ENSMUST00000157677 0.268±0.00 N/A 0.290±0.00 0.117±0.00 N/A N/A 0.233±0.00 N/A 0.100±0.00 0.329±0.05 N/A 0.306±0.00 0.077±0.00 N/A

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