C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MMS22-like, DNA repair protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154349 Mms22l-002 ENSMUSG00000045751 10090 + 4:24505162-24602949 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000154349
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000154349 0.344±0.00 0.224±0.00 1.324±0.04 0.373±0.17 0.598±0.00 0.081±0.07 1.655±0.71 0.024±0.01 0.631±0.00 0.874±0.09 0.801±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MX CIL_0007MX_0004 UCNEbase 4:22803646-24698662
CIL_0008CQ CIL_0008CQ_0002 VISTA 4:23912230-24515243
CIL_0007TH CIL_0007TH_0002 VISTA 4:24128853-24730297
CIL_00096U CIL_00096U_0002 VISTA 4:24369206-24970330

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275053 MMS22L-001 protein_coding Homo_sapiens 0 2963
ENST00000369251 MMS22L-010 protein_coding Homo_sapiens 0 2311
ENST00000484170 MMS22L-004 processed_transcript Homo_sapiens 0 285
ENST00000506256 MMS22L-011 processed_transcript Homo_sapiens 0 285
ENST00000508976 MMS22L-007 retained_intron Homo_sapiens 0 459
ENST00000509383 MMS22L-006 nonsense_mediated_decay Homo_sapiens 0 848
ENST00000510018 MMS22L-008 protein_coding Homo_sapiens 0 377
ENST00000511335 MMS22L-009 retained_intron Homo_sapiens 0.000000000000001 92

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