C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAR (HIV) RNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154948 Tarbp2-010 ENSMUSG00000023051 10090 + 15:102518557-102523219 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000154948
Transcript ID Placenta
ENSMUST00000154948 4.245±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0002 VISTA 15:102394217-102994945

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266987 TARBP2-001 protein_coding Homo_sapiens 0 1147
ENST00000394357 TARBP2-009 protein_coding Homo_sapiens 0 1094
ENST00000456234 TARBP2-006 protein_coding Homo_sapiens 0 1086
ENST00000546889 TARBP2-003 retained_intron Homo_sapiens 0 333
ENST00000547064 TARBP2-015 nonsense_mediated_decay Homo_sapiens 0 695
ENST00000547388 TARBP2-010 retained_intron Homo_sapiens 2.8026e-45 185
ENST00000548971 TARBP2-005 nonsense_mediated_decay Homo_sapiens 0 723
ENST00000549028 TARBP2-020 processed_transcript Homo_sapiens 0 453
ENST00000549572 TARBP2-007 nonsense_mediated_decay Homo_sapiens 0 551
ENST00000549610 TARBP2-002 retained_intron Homo_sapiens 0 507
ENST00000549679 TARBP2-008 nonsense_mediated_decay Homo_sapiens 0 725
ENST00000550147 TARBP2-004 nonsense_mediated_decay Homo_sapiens 0 1225
ENST00000550407 TARBP2-016 protein_coding Homo_sapiens 0 641
ENST00000551157 TARBP2-017 retained_intron Homo_sapiens 0 701
ENST00000551741 TARBP2-022 nonsense_mediated_decay Homo_sapiens 0 1120
ENST00000552650 TARBP2-012 retained_intron Homo_sapiens 0 507
ENST00000552817 TARBP2-011 protein_coding Homo_sapiens 0 597
ENST00000552857 TARBP2-021 protein_coding Homo_sapiens 0 259

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