C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | stromal antigen 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000155108  |
Stag1-007 |
ENSMUSG00000037286 |
10090 | + |
9:100643636-100957399  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001C8 | CIL_0001C8_0002 | CGP | 9:100552188-100959375 |
| CIL_0000WP | CIL_0000WP_0002 | CGP | 9:100597798-101034898 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000785 | IDA | chromatin |
| GO:0003682 | IDA | chromatin binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000236698
|
STAG1-002 | protein_coding | Homo_sapiens | 0 | 1441 |
|
ENST00000383202
|
STAG1-001 | protein_coding | Homo_sapiens | 0 | 1592 |
|
ENST00000434713
|
STAG1-201 | protein_coding | Homo_sapiens | 0 | 1592 |
|
ENST00000462818
|
STAG1-008 | retained_intron | Homo_sapiens | 0 | 396 |
|
ENST00000471595
|
PCCB-002 | protein_coding | Homo_sapiens | 0 | 641 |
|
ENST00000478469
|
PCCB-006 | protein_coding | Homo_sapiens | 0 | 641 |
|
ENST00000480733
|
STAG1-005 | protein_coding | Homo_sapiens | 0 | 870 |
|
ENST00000483235
|
STAG1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1592 |
|
ENST00000487065
|
STAG1-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 697 |
