C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | single-pass membrane protein with aspartate rich tail 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000159054  |
Smdt1-005 |
ENSMUSG00000022452 |
10090 | + |
15:82347220-82348869  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004BB | CIL_0004BB_0002 | CGP | 15:82329532-82345743 |
| CIL_00037D | CIL_00037D_0002 | CGP | 15:82338942-82349091 |
| CIL_0004BJ | CIL_0004BJ_0002 | CGP | 15:82338959-82354291 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005739 | IDA | mitochondrion |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000331479
|
SMDT1-001 | protein_coding | Homo_sapiens | 0 | 196 |
|
ENST00000422252
|
SMDT1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 202 |
|
ENST00000484235
|
SMDT1-002 | retained_intron | Homo_sapiens | 0 | 196 |
|
ENST00000571525
|
SMDT1-001 | protein_coding | Homo_sapiens | 0 | 196 |
|
ENST00000606595
|
SMDT1-005 | processed_transcript | Homo_sapiens | 0 | 198 |
|
ENST00000607293
|
SMDT1-201 | protein_coding | Homo_sapiens | 0 | 196 |
|
ENST00000608773
|
SMDT1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 202 |
|
ENST00000615504
|
SMDT1-202 | protein_coding | Homo_sapiens | 0 | 196 |
