C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: single-pass membrane protein with aspartate-rich tail 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331479 SMDT1-001 ENSG00000183172 9606 + 22:42079695-42084284 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331479
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331479 1.687±0.00 2.228±0.00 0.291±0.00 2.837±1.90 0.843±0.71 1.411±1.01 0.940±0.00 0.368±0.00 0.155±0.00 2.242±0.07 4.706±3.55 2.124±0.00 2.677±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037D CIL_00037D_0001 CGP 22:42074251-42084284
CIL_0004BJ CIL_0004BJ_0001 CGP 22:42079691-42090955

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0006851 IMP mitochondrial calcium ion transport
GO:0031305 IDA integral component of mitochondrial inner membrane
GO:0036444 IMP calcium ion transmembrane import into mitochondrion
GO:0051560 IMP mitochondrial calcium ion homeostasis
GO:1990246 IDA uniplex complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023086 Smdt1-001 protein_coding Mus_musculus 0 355
ENSMUST00000160994 Smdt1-003 processed_transcript Mus_musculus 0 198
ENSMUST00000159054 Smdt1-005 protein_coding Mus_musculus 0 196
ENSMUST00000162705 Smdt1-004 processed_transcript Mus_musculus 0 196
ENSMUST00000161892 Smdt1-002 nonsense_mediated_decay Mus_musculus 0 196

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