C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160070 Rpl30-ps2-001 ENSMUSG00000090007 10090 - 8:22230902-22231192 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160070
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160070 1.109±0.13 1.064±0.41 0.426±0.00 0.254±0.00 2.293±1.14 1.330±0.00 1.708±0.83 0.716±0.61 0.382±0.05 4.696±1.99 0.270±0.06 3.166±2.15 0.558±0.18 0.303±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287038 RPL30-001 protein_coding Homo_sapiens 0 361
ENST00000429309 RPL30P4-001 processed_pseudogene Homo_sapiens 0 278
ENST00000457129 RPL30P15-001 processed_pseudogene Homo_sapiens 0 276
ENST00000480085 RP1-249H1.3-001 processed_pseudogene Homo_sapiens 0 300
ENST00000482744 RPL30P14-001 processed_pseudogene Homo_sapiens 0 292
ENST00000517489 RPL30-004 retained_intron Homo_sapiens 0 303
ENST00000518850 RPL30-010 nonsense_mediated_decay Homo_sapiens 0 243
ENST00000521291 RPL30-007 protein_coding Homo_sapiens 0 361
ENST00000521534 RPL30-013 retained_intron Homo_sapiens 0 244
ENST00000521726 RPL30-003 protein_coding Homo_sapiens 0 353
ENST00000523172 RPL30-008 protein_coding Homo_sapiens 0 243

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