C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521534 RPL30-013 ENSG00000156482 9606 - 8:98041719-98043085 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KV CIL_0001KV_0001 CGP 8:97775057-98036716
CIL_0001KP CIL_0001KP_0001 CGP 8:98024851-98093610

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122265 Rpl30-ps9-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000142643 Rpl30-005 processed_transcript Mus_musculus 0 287
ENSMUST00000009039 Rpl30-002 protein_coding Mus_musculus 0 287
ENSMUST00000079735 Rpl30-001 protein_coding Mus_musculus 0 287
ENSMUST00000118307 Gm12191-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000076166 Rpl30-ps8-201 processed_pseudogene Mus_musculus 0 283
ENSMUST00000136653 Rpl30-006 retained_intron Mus_musculus 0 283
ENSMUST00000117119 Rpl30-ps10-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000119767 Rpl30-ps1-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000118664 Gm7429-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000117928 Rpl30-ps3-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000071536 Gm6570-201 processed_pseudogene Mus_musculus 0 272
ENSMUST00000096279 Gm10343-201 processed_pseudogene Mus_musculus 0 272
ENSMUST00000119573 Gm9703-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000135417 Rpl30-003 retained_intron Mus_musculus 0 248
ENSMUST00000160070 Rpl30-ps2-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000122391 Gm14530-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000117313 Gm13714-001 processed_pseudogene Mus_musculus 2e-33 147

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