C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: upstream transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160335 Usf1-009 ENSMUSG00000026641 10090 + 1:171411334-171417356 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160335
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160335 14.915±3.20 23.410±3.42 9.326±0.60 47.110±1.39 17.707±4.81 8.509±0.40 13.926±0.68 8.296±2.14 24.864±3.71 5.216±0.29 38.856±8.08 12.724±0.00 3.844±0.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026D CIL_00026D_0002 CGP 1:171411313-171464603

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368019 USF1-003 protein_coding Homo_sapiens 0 643
ENST00000368020 USF1-002 protein_coding Homo_sapiens 0 869
ENST00000368021 USF1-001 protein_coding Homo_sapiens 0 937
ENST00000473969 USF1-004 nonsense_mediated_decay Homo_sapiens 0 510
ENST00000491629 USF1-007 retained_intron Homo_sapiens 0 758
ENST00000496363 USF1-006 retained_intron Homo_sapiens 0 885
ENST00000528768 USF1-009 protein_coding Homo_sapiens 0 207
ENST00000529476 USF1-010 retained_intron Homo_sapiens 0 403
ENST00000531842 USF1-011 protein_coding Homo_sapiens 0 501
ENST00000534633 USF1-008 protein_coding Homo_sapiens 0 717

Loading