C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transformer 2 beta homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161774 Tra2b-005 ENSMUSG00000022858 10090 - 16:22246899-22252649 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000161774
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000161774 13.147±0.00 49.315±0.00 41.840±7.97 19.611±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZT CIL_0008ZT_0002 VISTA 16:21809929-22410861
CIL_0003YC CIL_0003YC_0003 CGP 16:22059009-22266005
CIL_0006RI CIL_0006RI_0002 CGP 16:22244549-22439719

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259043 TRA2B-014 protein_coding Homo_sapiens 0 329
ENST00000382191 TRA2B-008 protein_coding Homo_sapiens 0 512
ENST00000453386 TRA2B-001 protein_coding Homo_sapiens 0 512
ENST00000456380 TRA2B-003 nonsense_mediated_decay Homo_sapiens 0 512
ENST00000463328 TRA2B-006 retained_intron Homo_sapiens 0 512
ENST00000465245 TRA2B-010 processed_transcript Homo_sapiens 0 191
ENST00000466832 TRA2B-007 retained_intron Homo_sapiens 0 438
ENST00000487615 TRA2B-004 retained_intron Homo_sapiens 0 512
ENST00000492417 TRA2B-005 retained_intron Homo_sapiens 0 512

Loading