C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162626 Psma3-002 ENSMUSG00000060073 10090 + 12:70974671-70994921 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K7 CIL_0001K7_0002 CGP 12:70937857-70996347
CIL_0004LX CIL_0004LX_0002 CGP 12:70974621-71098592

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IEA endopeptidase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005839 IDA proteasome core complex
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0019773 IEA proteasome core complex, alpha-subunit complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000130105 psma3-001 protein_coding Danio_rerio 0 433
ENST00000216455 PSMA3-001 protein_coding Homo_sapiens 0 985
ENST00000412908 PSMA3-002 protein_coding Homo_sapiens 0 859
ENST00000424879 RP4-580O19.2-001 processed_pseudogene Homo_sapiens 0 551
ENST00000553665 PSMA3-008 retained_intron Homo_sapiens 0 475
ENST00000553677 PSMA3-007 protein_coding Homo_sapiens 0 272
ENST00000554812 PSMA3-006 retained_intron Homo_sapiens 0 654
ENST00000555743 PSMA3-016 retained_intron Homo_sapiens 0 713
ENST00000555931 PSMA3-011 nonsense_mediated_decay Homo_sapiens 0 558
ENST00000556321 PSMA3-015 retained_intron Homo_sapiens 0 302
ENST00000557087 PSMA3-012 nonsense_mediated_decay Homo_sapiens 0 678
ENST00000557290 PSMA3-004 retained_intron Homo_sapiens 0 272
ENST00000557508 PSMA3-013 protein_coding Homo_sapiens 0 931

Loading