C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001K7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131966-ENSG00000100567 CGP 9606 14:58200080-58272012
GeneTranscriptPositionBiotype
ENSG00000100567 (PSMA3)
proteasome (prosome, macropain) subunit, alpha type, 3 		ENST00000216455 (PSMA3-001) 58244831-58272007 protein_coding
ENST00000412908 (PSMA3-002) 58244877-58272012 protein_coding
ENST00000553665 (PSMA3-008) 58244856-58258454 retained_intron
ENST00000553677 (PSMA3-007) 58257925-58272006 protein_coding
ENST00000554207 (PSMA3-005) 58263524-58267796 retained_intron
ENST00000554456 (PSMA3-014) 58244874-58245478 processed_transcript
ENST00000554812 (PSMA3-006) 58244846-58268139 retained_intron
ENST00000555743 (PSMA3-016) 58244879-58267528 retained_intron
ENST00000555931 (PSMA3-011) 58244873-58267504 nonsense_mediated_decay
ENST00000556321 (PSMA3-015) 58247789-58258081 retained_intron
ENST00000557087 (PSMA3-012) 58244866-58270998 nonsense_mediated_decay
ENST00000557290 (PSMA3-004) 58269975-58272004 retained_intron
ENST00000557508 (PSMA3-013) 58244904-58272007 protein_coding
ENSG00000131966 (ACTR10)
actin-related protein 10 homolog (S. cerevisiae) 		ENST00000254286 (ACTR10-002) 58200138-58235636 protein_coding
ENST00000545307 (ACTR10-001) 58200080-58234760 nonsense_mediated_decay
ENST00000553907 (ACTR10-021) 58223623-58234786 nonsense_mediated_decay
ENST00000554402 (ACTR10-018) 58200219-58234768 nonsense_mediated_decay
ENST00000554642 (ACTR10-011) 58223638-58234790 protein_coding
ENST00000554790 (ACTR10-019) 58219670-58232268 retained_intron
ENST00000555229 (ACTR10-017) 58200142-58234755 nonsense_mediated_decay
ENST00000555337 (ACTR10-014) 58200149-58232161 nonsense_mediated_decay
ENST00000555965 (ACTR10-020) 58223599-58232268 retained_intron
ENST00000556243 (ACTR10-003) 58200211-58209107 nonsense_mediated_decay
ENST00000556312 (ACTR10-004) 58200170-58209257 retained_intron
ENST00000556449 (ACTR10-009) 58223493-58232108 retained_intron
ENST00000556694 (ACTR10-012) 58211084-58223827 retained_intron
ENST00000556748 (ACTR10-005) 58200154-58223856 nonsense_mediated_decay
ENST00000557583 (ACTR10-008) 58219518-58230476 retained_intron
ENST00000557711 (ACTR10-006) 58213034-58234734 retained_intron
ENSG00000258682 (CTD-2002H8.2)
 ENST00000557322 (CTD-2002H8.2-001) 58264662-58269681 sense_overlapping
CIL_0001K7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021076-ENSMUSG00000060073 CGP 10090 12:70937857-70996347
GeneTranscriptPositionBiotype
ENSMUSG00000021076 (Actr10)
ARP10 actin-related protein 10 		ENSMUST00000021479 (Actr10-201) 70937857-70964718 protein_coding
ENSMUSG00000060073 (Psma3)
proteasome (prosome, macropain) subunit, alpha type 3 		ENSMUST00000071704 (Psma3-005) 70974715-70994475 nonsense_mediated_decay
ENSMUST00000160027 (Psma3-001) 70974621-70996347 protein_coding
ENSMUST00000160683 (Psma3-004) 70974671-70994501 retained_intron
ENSMUST00000160864 (Psma3-007) 70974683-70994505 protein_coding
ENSMUST00000161041 (Psma3-003) 70974708-70979694 retained_intron
ENSMUST00000162626 (Psma3-002) 70974671-70994921 nonsense_mediated_decay
ENSMUST00000162851 (Psma3-008) 70974689-70994504 nonsense_mediated_decay
ENSMUST00000162898 (Psma3-009) 70986892-70994505 protein_coding
ENSMUST00000163035 (Psma3-006) 70974719-70984837 retained_intron
ENSMUSG00000085622 (3110056K07Rik)
RIKEN cDNA 3110056K07 gene 		ENSMUST00000127129 (3110056K07Rik-001) 70991615-71015596 antisense
ENSMUST00000136690 (3110056K07Rik-002) 71009795-71015832 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001K7_0001ENSG00000100567ENST00000216455ENST00000412908ENST00000553665ENST00000553677ENST00000554207ENST00000554456ENST00000554812ENST00000555743ENST00000555931ENST00000556321ENST00000557087ENST00000557290ENST00000557508ENSG00000131966ENST00000254286ENST00000545307ENST00000553907ENST00000554402ENST00000554642ENST00000554790ENST00000555229ENST00000555337ENST00000555965ENST00000556243ENST00000556312ENST00000556449ENST00000556694ENST00000556748ENST00000557583ENST00000557711ENSG00000258682ENST00000557322CIL_0001K7_0002ENSMUSG00000021076ENSMUST00000021479ENSMUSG00000060073ENSMUST00000071704ENSMUST00000160027ENSMUST00000160683ENSMUST00000160864ENSMUST00000161041ENSMUST00000162626ENSMUST00000162851ENSMUST00000162898ENSMUST00000163035ENSMUSG00000085622ENSMUST00000127129ENSMUST00000136690
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001K7_0001ENSG00000100567ENST00000216455ENST00000412908ENST00000554812ENST00000555743ENST00000557087ENST00000557290ENST00000557508ENSG00000131966ENST00000254286ENST00000545307ENST00000553907ENST00000554402ENST00000554642ENST00000554790ENST00000555229ENST00000555965ENST00000556694ENST00000557711ENSG00000258682ENST00000557322CIL_0001K7_0002ENSMUSG00000021076ENSMUST00000021479ENSMUSG00000060073ENSMUST00000071704ENSMUST00000160027ENSMUST00000160683ENSMUST00000160864ENSMUST00000162851ENSMUSG00000085622ENSMUST00000127129ENSMUST00000136690
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100567 ENST00000216455 7.352±0.00 N/A N/A 6.591±0.52 23.136±4.99 13.329±3.36 21.784±12.93 19.009±0.00 26.791±15.07 12.382±3.89 24.794±7.32 39.296±12.03 47.740±13.83 17.308±7.51
ENST00000412908 4.326±0.00 N/A N/A 4.800±0.00 N/A 5.367±0.00 N/A N/A N/A 8.824±0.00 N/A 62.553±0.00 N/A 8.888±0.96
ENST00000553665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554812 N/A N/A N/A 2.425±0.00 N/A 4.717±0.00 2.261±0.00 N/A N/A N/A N/A 6.097±0.00 N/A N/A
ENST00000555743 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.821±0.00 N/A N/A N/A N/A
ENST00000555931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557087 N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.290±0.00 N/A 107.235±0.00 50.112±0.00 36.092±0.00
ENST00000557290 N/A N/A N/A N/A N/A N/A N/A N/A 6.577±0.00 6.633±0.00 N/A N/A N/A N/A
ENST00000557508 15.089±0.00 38.446±0.00 N/A 12.163±0.19 17.993±0.00 8.454±0.00 N/A 49.973±0.00 N/A N/A N/A 32.687±0.00 N/A 12.378±0.00
ENSG00000131966 ENST00000254286 1.247±0.00 2.887±0.00 1.105±0.00 2.990±0.00 1.731±0.00 2.620±0.00 N/A 3.771±0.00 N/A 1.837±0.00 N/A 3.664±2.18 2.442±0.00 2.831±0.00
ENST00000545307 N/A N/A N/A N/A N/A N/A N/A N/A 1.345±0.00 N/A 2.986±0.00 8.071±0.00 9.187±0.00 6.811±0.00
ENST00000553907 2.686±0.00 5.172±0.00 N/A N/A 3.796±0.00 N/A N/A N/A N/A 3.691±0.00 N/A 29.049±0.00 14.819±0.00 11.183±5.71
ENST00000554402 2.193±0.00 N/A N/A N/A 4.134±0.00 1.639±0.00 3.345±0.55 5.888±5.25 4.047±2.52 4.167±0.00 3.473±0.04 10.129±2.37 6.290±2.37 5.566±0.00
ENST00000554642 N/A N/A 3.209±0.00 20.480±0.00 9.911±0.00 5.307±0.00 2.829±0.00 5.454±0.00 3.569±0.13 8.849±0.00 N/A 12.277±0.00 8.150±0.00 N/A
ENST00000554790 N/A N/A N/A 19.923±0.00 N/A 4.758±0.00 3.795±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000555229 7.904±0.00 9.143±0.00 N/A 20.486±0.00 10.545±0.00 13.049±0.00 9.454±8.48 15.349±0.00 4.082±0.00 10.571±0.00 4.328±0.00 11.676±4.83 12.798±2.71 15.436±0.00
ENST00000555337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555965 N/A N/A 9.774±0.00 N/A N/A 6.046±0.00 N/A N/A N/A N/A 9.176±0.00 N/A N/A N/A
ENST00000556243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556694 N/A N/A N/A N/A N/A N/A N/A 3.858±0.00 N/A N/A N/A N/A N/A N/A
ENST00000556748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557711 N/A N/A 0.985±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258682 ENST00000557322 0.203±0.00 1.181±0.00 1.996±0.00 0.463±0.21 0.671±0.28 0.663±0.42 0.546±0.25 0.669±0.00 0.783±0.72 0.379±0.00 N/A 0.623±0.39 0.459±0.00 0.424±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021076 ENSMUST00000021479 5.336±2.04 4.170±0.96 5.877±0.44 12.403±3.81 3.323±1.20 3.638±1.02 3.541±0.70 7.002±1.06 4.365±1.45 4.937±0.72 8.114±0.88 4.540±2.84 7.079±2.23 13.852±2.81
ENSMUSG00000060073 ENSMUST00000071704 27.279±7.17 52.886±10.29 44.762±1.06 21.684±7.46 43.093±8.40 28.855±7.36 9.349±3.85 27.585±7.82 62.697±9.63 32.115±5.32 37.819±7.37 44.551±17.15 43.929±16.81 27.268±8.55
ENSMUST00000160027 2.874±1.03 2.589±0.41 N/A 8.921±3.98 3.178±0.00 2.028±0.48 1.546±0.16 3.110±0.23 3.783±0.44 2.696±0.14 6.595±0.48 2.866±0.52 N/A N/A
ENSMUST00000160683 9.471±1.76 13.471±1.67 58.923±5.95 22.284±14.00 12.979±4.39 7.797±2.63 9.425±0.83 11.315±2.63 32.644±23.00 12.976±2.39 26.470±3.31 18.275±6.59 39.843±16.24 15.566±2.70
ENSMUST00000160864 17.624±4.26 N/A 42.154±0.56 23.155±0.00 91.573±26.01 N/A 16.414±8.79 14.137±6.03 58.635±11.33 13.514±0.16 30.224±6.97 69.519±11.64 54.009±16.56 15.812±0.00
ENSMUST00000161041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162851 N/A N/A N/A 129.496±0.00 N/A N/A N/A N/A N/A N/A N/A 219.693±0.00 377.487±217.88 161.616±0.00
ENSMUST00000162898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085622 ENSMUST00000127129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.376±0.00 N/A N/A N/A
ENSMUST00000136690 2.510±1.17 1.641±0.88 N/A 4.854±0.48 2.770±1.32 2.124±0.30 2.262±0.52 3.382±0.50 2.976±2.10 4.063±0.46 1.771±0.55 3.948±3.88 5.529±2.19 4.094±1.07

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