| Transcript ID | Breast | Muscle | Placenta |
|---|---|---|---|
| ENST00000554541 | 31.670±4.93 | 14.557±0.00 | 45.988±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | proteasome (prosome, macropain) subunit, alpha type, 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000554541  |
PSMA6-003 |
ENSG00000100902 |
9606 | + |
14:35292349-35317457  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00045I | CIL_00045I_0001 | CGP | 14:35122549-35317493 |
| CIL_0008MF | CIL_0008MF_0001 | VISTA | 14:35250818-35851792 |
| CIL_0008ME | CIL_0008ME_0001 | VISTA | 14:35273755-35874460 |
| CIL_0001RJ | CIL_0001RJ_0001 | CGP | 14:35278633-35404749 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004175 | IEA | endopeptidase activity |
| GO:0006511 | IEA | ubiquitin-dependent protein catabolic process |
| GO:0019773 | IEA | proteasome core complex, alpha-subunit complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000162711
|
Psma6-003 | nonsense_mediated_decay | Mus_musculus | 0 | 1144 |
|
ENSMUST00000021412
|
Psma6-001 | protein_coding | Mus_musculus | 0 | 1007 |
|
ENSMUST00000163070
|
Psma6-002 | protein_coding | Mus_musculus | 0 | 876 |
|
ENSMUST00000162972
|
Psma6-004 | processed_transcript | Mus_musculus | 0 | 494 |
