C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162851 Psma3-008 ENSMUSG00000060073 10090 + 12:70974689-70994504 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000162851
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000162851 129.496±0.00 219.693±0.00 377.487±217.88 161.616±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K7 CIL_0001K7_0002 CGP 12:70937857-70996347
CIL_0004LX CIL_0004LX_0002 CGP 12:70974621-71098592

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IEA endopeptidase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005839 IDA proteasome core complex
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0019773 IEA proteasome core complex, alpha-subunit complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216455 PSMA3-001 protein_coding Homo_sapiens 0 420
ENST00000412908 PSMA3-002 protein_coding Homo_sapiens 0 420
ENST00000424879 RP4-580O19.2-001 processed_pseudogene Homo_sapiens 0 335
ENST00000553677 PSMA3-007 protein_coding Homo_sapiens 0 272
ENST00000557087 PSMA3-012 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000557290 PSMA3-004 retained_intron Homo_sapiens 0 272
ENST00000557508 PSMA3-013 protein_coding Homo_sapiens 0 420

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