C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: leucine-rich repeats and calponin homology (CH) domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164486 Lrch3-007 ENSMUSG00000022801 10090 + 16:32914127-32973924 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000164486
Transcript ID Adrenal
ENSMUST00000164486 14.801±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006C7 CIL_0006C7_0002 CGP 16:32877500-33015647
CIL_0006C8 CIL_0006C8_0002 CGP 16:32914100-33056218

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334859 LRCH3-004 protein_coding Homo_sapiens 0 470
ENST00000414675 LRCH3-003 protein_coding Homo_sapiens 0 470
ENST00000425562 LRCH3-006 protein_coding Homo_sapiens 0 470
ENST00000438796 LRCH3-001 protein_coding Homo_sapiens 0 470
ENST00000441090 LRCH3-002 protein_coding Homo_sapiens 0 342
ENST00000443727 LRCH3-011 nonsense_mediated_decay Homo_sapiens 0 676

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