C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006C8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186001-ENSG00000114473 CGP 9606 3:197791226-197960142
GeneTranscriptPositionBiotype
ENSG00000114473 (IQCG)
IQ motif containing G 		ENST00000265239 (IQCG-001) 197889075-197960019 protein_coding
ENST00000416896 (IQCG-008) 197926097-197959595 protein_coding
ENST00000452735 (IQCG-010) 197943898-197949869 protein_coding
ENST00000453254 (IQCG-004) 197913722-197949885 protein_coding
ENST00000455191 (IQCG-003) 197889077-197949925 protein_coding
ENST00000463651 (IQCG-009) 197938666-197949925 processed_transcript
ENST00000469822 (IQCG-012) 197906368-197912952 processed_transcript
ENST00000473225 (IQCG-011) 197913351-197916420 processed_transcript
ENST00000478903 (IQCG-006) 197889078-197913284 retained_intron
ENST00000480302 (IQCG-007) 197938660-197960142 processed_transcript
ENST00000485787 (IQCG-013) 197889413-197913034 processed_transcript
ENST00000490748 (IQCG-005) 197889078-197939032 retained_intron
ENST00000493624 (IQCG-002) 197956641-197960015 retained_intron
ENSG00000182899 (RPL35A)
ribosomal protein L35a 		ENST00000329092 (RPL35A-005) 197950193-197954147 processed_transcript
ENST00000429437 (RPL35A-007) 197950206-197955817 nonsense_mediated_decay
ENST00000439255 (RPL35A-008) 197950954-197955817 nonsense_mediated_decay
ENST00000442341 (RPL35A-006) 197950557-197954120 protein_coding
ENST00000448864 (RPL35A-002) 197950194-197955851 protein_coding
ENST00000464167 (RPL35A-001) 197949987-197956610 protein_coding
ENST00000474640 (RPL35A-009) 197953563-197955851 retained_intron
ENST00000485439 (RPL35A-004) 197950190-197954451 retained_intron
ENST00000496582 (RPL35A-003) 197950193-197951665 retained_intron
ENSG00000186001 (LRCH3)
leucine-rich repeats and calponin homology (CH) domain containing 3 		ENST00000334859 (LRCH3-004) 197791274-197871585 protein_coding
ENST00000414675 (LRCH3-003) 197791264-197883772 protein_coding
ENST00000425562 (LRCH3-006) 197791279-197884302 protein_coding
ENST00000428136 (LRCH3-009) 197866215-197883376 protein_coding
ENST00000433298 (LRCH3-017) 197848001-197883998 protein_coding
ENST00000438796 (LRCH3-001) 197791235-197888436 protein_coding
ENST00000441090 (LRCH3-002) 197791264-197883813 protein_coding
ENST00000443727 (LRCH3-011) 197791226-197829616 nonsense_mediated_decay
ENST00000452660 (LRCH3-015) 197847959-197880559 protein_coding
ENST00000461674 (LRCH3-014) 197847845-197870176 retained_intron
ENST00000466054 (LRCH3-021) 197871423-197876340 retained_intron
ENST00000466845 (LRCH3-023) 197854390-197859439 retained_intron
ENST00000471667 (LRCH3-018) 197858818-197880625 retained_intron
ENST00000473177 (LRCH3-020) 197858822-197880612 retained_intron
ENST00000476664 (LRCH3-022) 197875694-197883685 retained_intron
ENST00000481048 (LRCH3-016) 197852328-197866179 retained_intron
ENST00000483442 (LRCH3-019) 197858821-197875760 retained_intron
ENST00000493726 (LRCH3-012) 197820333-197823465 processed_transcript
ENST00000494069 (LRCH3-013) 197835797-197848499 retained_intron
ENSG00000199306 (RNU6-858P)
RNA, U6 small nuclear 858, pseudogene 		ENST00000362436 (RNU6-858P-201) 197894507-197894613 snRNA
ENSG00000234742 (AC144530.1)
 ENST00000452862 (AC144530.1-001) 197850400-197850954 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006C8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022801-ENSMUSG00000035578 CGP 10090 16:32914100-33056218
GeneTranscriptPositionBiotype
ENSMUSG00000022801 (Lrch3)
leucine-rich repeats and calponin homology (CH) domain containing 3 		ENSMUST00000023491 (Lrch3-001) 32914100-33015647 protein_coding
ENSMUST00000133399 (Lrch3-003) 32954698-32961734 processed_transcript
ENSMUST00000135193 (Lrch3-005) 32914142-33012699 protein_coding
ENSMUST00000142290 (Lrch3-004) 32986003-32998631 protein_coding
ENSMUST00000156928 (Lrch3-002) 32914123-32989046 retained_intron
ENSMUST00000163428 (Lrch3-009) 32979397-32998578 protein_coding
ENSMUST00000164486 (Lrch3-007) 32914127-32973924 nonsense_mediated_decay
ENSMUST00000165616 (Lrch3-010) 32914142-33012490 protein_coding
ENSMUST00000165826 (Lrch3-006) 32979425-32998520 protein_coding
ENSMUST00000170201 (Lrch3-012) 32914122-33013143 protein_coding
ENSMUST00000170899 (Lrch3-008) 32914122-33013143 protein_coding
ENSMUST00000171118 (Lrch3-011) 32914122-33013143 protein_coding
ENSMUSG00000070225 (n-R5s33)
nuclear encoded rRNA 5S 33 		ENSMUST00000093713 (n-R5s33-201) 33001903-33002021 rRNA
ENSMUSG00000091997 (Gm6611)
predicted gene 6611 		ENSMUST00000163830 (Gm6611-001) 32923218-32924489 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006C8_0001ENSG00000114473ENST00000265239ENST00000416896ENST00000453254ENST00000455191ENST00000463651ENST00000478903ENST00000480302ENST00000485787ENST00000490748ENST00000493624ENSG00000182899ENST00000329092ENST00000429437ENST00000442341ENST00000448864ENST00000464167ENST00000485439ENSG00000186001ENST00000334859ENST00000414675ENST00000425562ENST00000428136ENST00000438796ENSG00000199306ENST00000362436ENSG00000234742ENST00000452862CIL_0006C8_0002ENSMUSG00000022801ENSMUST00000023491ENSMUST00000164486ENSMUST00000170201ENSMUSG00000070225ENSMUST00000093713ENSMUSG00000091997ENSMUST00000163830
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114473 ENST00000265239 N/A N/A 0.540±0.00 0.760±0.31 1.554±0.85 0.504±0.00 N/A 0.733±0.00 0.225±0.04 0.792±0.00 N/A 0.702±0.44 0.729±0.00 7.186±2.25
ENST00000416896 N/A N/A N/A N/A N/A 1.155±0.00 N/A N/A 0.643±0.00 N/A N/A N/A N/A N/A
ENST00000452735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453254 N/A N/A N/A N/A 0.486±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455191 N/A N/A N/A 3.321±0.00 N/A 0.350±0.00 0.449±0.00 1.416±0.00 0.301±0.00 8.220±0.00 N/A 0.709±0.00 0.308±0.11 15.042±0.00
ENST00000463651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.008±0.00 N/A N/A N/A
ENST00000469822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478903 N/A N/A N/A N/A 2.859±0.00 N/A 0.770±0.00 N/A N/A N/A N/A 20.047±21.11 5.374±6.78 12.413±4.22
ENST00000480302 N/A N/A N/A N/A N/A N/A N/A N/A 1.158±0.00 1.624±0.00 N/A N/A N/A N/A
ENST00000485787 N/A N/A N/A N/A 3.579±0.00 N/A N/A 2.667±0.00 N/A N/A 0.594±0.00 N/A N/A N/A
ENST00000490748 N/A N/A N/A N/A N/A N/A N/A N/A 0.230±0.00 0.792±0.00 N/A N/A N/A N/A
ENST00000493624 0.409±0.00 N/A N/A N/A N/A 0.210±0.00 N/A 0.124±0.00 N/A N/A 0.156±0.00 N/A N/A N/A
ENSG00000182899 ENST00000329092 N/A N/A N/A 31.519±0.00 N/A N/A 27.683±0.00 28.155±0.00 N/A 26.699±0.00 N/A 52.373±0.00 N/A N/A
ENST00000429437 208.512±0.00 321.452±0.00 3.882±0.00 N/A 176.607±0.00 163.599±144.66 104.185±0.00 92.436±0.00 65.831±0.00 190.658±0.00 70.999±53.49 906.267±0.00 N/A 147.278±0.00
ENST00000439255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442341 N/A N/A N/A N/A 62.819±0.00 27.162±0.00 20.692±0.00 38.294±0.00 N/A 34.866±0.00 21.525±0.00 77.455±24.46 92.708±0.00 40.088±0.00
ENST00000448864 390.880±0.00 503.050±0.00 13.819±0.00 158.077±116.55 237.282±162.11 411.372±362.21 150.062±117.04 175.374±129.55 159.136±60.83 424.602±348.21 157.789±128.81 626.462±602.92 446.829±273.46 303.762±274.46
ENST00000464167 N/A N/A 1.768±0.00 8.127±0.00 N/A N/A N/A N/A N/A N/A 3.719±0.00 60.239±0.00 N/A 3.420±0.00
ENST00000474640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485439 N/A N/A 4.940±0.00 20.667±0.00 34.273±0.00 16.962±0.00 12.331±0.00 13.012±0.00 40.381±0.00 15.638±0.00 N/A 26.046±0.00 N/A N/A
ENST00000496582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186001 ENST00000334859 N/A N/A 1.711±0.00 2.473±0.00 3.013±0.00 2.162±0.00 2.044±0.00 N/A 3.295±0.00 7.423±0.00 5.736±0.00 3.050±0.58 2.696±0.00 9.708±0.00
ENST00000414675 N/A N/A N/A N/A N/A N/A N/A N/A 2.553±0.00 3.421±0.00 N/A N/A N/A N/A
ENST00000425562 1.094±0.00 N/A N/A N/A 2.157±0.00 1.581±0.00 2.546±0.00 N/A 0.935±0.00 1.846±0.00 N/A N/A N/A 4.202±0.00
ENST00000428136 N/A N/A N/A 2.406±0.00 N/A N/A N/A N/A N/A N/A 1.393±0.00 N/A N/A 2.778±0.00
ENST00000433298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438796 N/A 4.192±0.00 N/A N/A N/A 1.043±0.00 0.752±0.00 N/A N/A N/A 0.877±0.00 1.158±0.01 N/A 2.893±0.37
ENST00000441090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199306 ENST00000362436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.035±0.00 N/A 0.494±0.00
ENSG00000234742 ENST00000452862 0.183±0.00 0.422±0.00 N/A 0.231±0.00 0.220±0.12 0.563±0.17 0.109±0.01 0.255±0.00 0.071±0.05 0.661±0.25 0.123±0.00 0.634±0.00 0.204±0.02 0.166±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022801 ENSMUST00000023491 8.023±5.05 9.936±1.08 11.305±1.30 10.037±4.09 4.942±1.51 2.735±0.94 2.046±0.44 2.616±1.05 3.294±2.12 N/A 1.883±0.73 6.373±2.70 6.636±4.12 4.826±1.87
ENSMUST00000133399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164486 N/A 14.801±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170201 N/A 4.153±0.00 N/A N/A N/A N/A N/A N/A N/A 7.251±0.00 N/A N/A N/A N/A
ENSMUST00000170899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000070225 ENSMUST00000093713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.310±0.00 N/A
ENSMUSG00000091997 ENSMUST00000163830 0.070±0.04 N/A 0.094±0.02 0.214±0.02 0.124±0.05 0.079±0.00 0.076±0.04 0.125±0.10 0.133±0.07 0.169±0.02 0.052±0.02 0.166±0.05 0.229±0.10 4.570±0.96

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