C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9006
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165520 Gm9006-001 ENSMUSG00000079359 10090 + 12:107613000-107613840 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000165520
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000165520 0.051±0.00 0.010±0.00 0.068±0.00 0.287±0.08 0.114±0.05 0.128±0.02 0.079±0.00 0.187±0.16 0.023±0.00 0.061±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KT CIL_0007KT_0002 UCNEbase 12:107085268-108123079
CIL_00080U CIL_00080U_0002 VISTA 12:107477918-108078911

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315377 RPS6-003 protein_coding Homo_sapiens 2e-28 130
ENST00000380384 RPS6-002 protein_coding Homo_sapiens 4e-28 130
ENST00000380394 RPS6-001 protein_coding Homo_sapiens 4e-28 130
ENST00000393214 AC004386.4-001 processed_pseudogene Homo_sapiens 5e-20 102
ENST00000431996 RP11-309P22.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000463969 RP11-864G5.1-001 processed_pseudogene Homo_sapiens 2e-28 130
ENST00000464444 AD000092.3-001 processed_pseudogene Homo_sapiens 3e-27 126
ENST00000479691 RPS6P16-001 processed_pseudogene Homo_sapiens 2e-27 126
ENST00000498815 RPS6-005 processed_transcript Homo_sapiens 1e-28 130

Loading