C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463969 RP11-864G5.1-001 ENSG00000243777 9606 + 11:102295060-102295806 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverLungMuscleOvaryTestisENST00000463969
Transcript ID Adrenal Brain Breast Colon Liver Lung Muscle Ovary Testis
ENST00000463969 0.017±0.00 0.017±0.00 0.017±0.00 0.078±0.00 0.015±0.00 0.182±0.00 0.015±0.00 0.022±0.00 0.030±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118499 Rps6-ps4-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000102814 Rps6-001 protein_coding Mus_musculus 0 603
ENSMUST00000074205 Rps6-ps1-201 processed_pseudogene Mus_musculus 0 597
ENSMUST00000121853 Gm11263-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000120762 Gm8172-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000100510 Gm16409-201 processed_pseudogene Mus_musculus 0 586
ENSMUST00000118010 Rps6-ps3-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000121487 Gm11604-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000079841 Rps6-ps2-201 processed_pseudogene Mus_musculus 0 547
ENSMUST00000118824 Gm12242-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000122061 Gm14138-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000118220 Gm8145-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000121578 Gm15388-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000120323 Gm15390-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000191059 RP24-406F14.3-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000118255 Gm14172-001 processed_pseudogene Mus_musculus 2e-39 167
ENSMUST00000118747 Gm15233-001 processed_pseudogene Mus_musculus 6e-34 148
ENSMUST00000165520 Gm9006-001 processed_pseudogene Mus_musculus 2e-28 130
ENSMUST00000117178 Gm14481-001 processed_pseudogene Mus_musculus 0.000000000003 77
ENSMUST00000188996 RP23-307G23.1-001 processed_pseudogene Mus_musculus 0.00001 55
ENSMUST00000136174 Rps6-002 processed_transcript Mus_musculus 0 488
ENSMUST00000123229 Rps6-004 processed_transcript Mus_musculus 0 388
ENSMUST00000130001 Rps6-003 processed_transcript Mus_musculus 8e-32 141
ENSMUST00000120745 Gm9143-001 processed_pseudogene Mus_musculus 0 571

Loading