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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ribosomal protein S6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000380384  |
RPS6-002 |
ENSG00000137154 |
9606 | - |
9:19376270-19380206  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007DD | CIL_0007DD_0001 | CGP | 9:19230435-19380254 |
| CIL_0007DC | CIL_0007DC_0001 | CGP | 9:19375715-19452020 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003735 | IEA | structural constituent of ribosome |
| GO:0005622 | IEA | intracellular |
| GO:0005737 | IDA | cytoplasm |
| GO:0005840 | IEA | ribosome |
| GO:0006412 | IEA | translation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000102814
|
Rps6-001 | protein_coding | Mus_musculus | 0 | 883 |
|
ENSMUST00000118499
|
Rps6-ps4-001 | processed_pseudogene | Mus_musculus | 0 | 870 |
|
ENSMUST00000120762
|
Gm8172-001 | processed_pseudogene | Mus_musculus | 0 | 859 |
|
ENSMUST00000100510
|
Gm16409-201 | processed_pseudogene | Mus_musculus | 0 | 854 |
|
ENSMUST00000074205
|
Rps6-ps1-201 | processed_pseudogene | Mus_musculus | 0 | 848 |
|
ENSMUST00000121853
|
Gm11263-001 | processed_pseudogene | Mus_musculus | 0 | 841 |
|
ENSMUST00000118010
|
Rps6-ps3-001 | processed_pseudogene | Mus_musculus | 0 | 832 |
|
ENSMUST00000122061
|
Gm14138-001 | processed_pseudogene | Mus_musculus | 0 | 793 |
|
ENSMUST00000079841
|
Rps6-ps2-201 | processed_pseudogene | Mus_musculus | 0 | 782 |
|
ENSMUST00000136174
|
Rps6-002 | processed_transcript | Mus_musculus | 0 | 765 |
|
ENSMUST00000121487
|
Gm11604-001 | processed_pseudogene | Mus_musculus | 0 | 761 |
|
ENSMUST00000118824
|
Gm12242-001 | processed_pseudogene | Mus_musculus | 0 | 737 |
|
ENSMUST00000118220
|
Gm8145-001 | processed_pseudogene | Mus_musculus | 0 | 697 |
|
ENSMUST00000123229
|
Rps6-004 | processed_transcript | Mus_musculus | 0 | 568 |
|
ENSMUST00000118255
|
Gm14172-001 | processed_pseudogene | Mus_musculus | 0 | 278 |
|
ENSMUST00000130001
|
Rps6-003 | processed_transcript | Mus_musculus | 0 | 196 |
|
ENSMUST00000118747
|
Gm15233-001 | processed_pseudogene | Mus_musculus | 8.40779e-45 | 185 |
|
ENSMUST00000165520
|
Gm9006-001 | processed_pseudogene | Mus_musculus | 4e-28 | 130 |
|
ENSMUST00000183833
|
Gm27225-001 | processed_pseudogene | Mus_musculus | 0.00000000000003 | 84 |
|
ENSMUST00000117178
|
Gm14481-001 | processed_pseudogene | Mus_musculus | 0.000000000005 | 77 |
|
ENSMUST00000120745
|
Gm9143-001 | processed_pseudogene | Mus_musculus | 0 | 793 |
