C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type, 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557929 PSMA4-005 ENSG00000041357 9606 + 15:78540467-78546610 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLungOvaryPlacentaENST00000557929
Transcript ID Brain Breast Colon Heart Lung Ovary Placenta
ENST00000557929 7.839±0.00 8.231±0.00 8.003±0.00 4.146±0.00 15.080±0.00 17.143±7.15 11.844±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TW CIL_0003TW_0001 CGP 15:78540405-78595269

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034848 Psma4-001 protein_coding Mus_musculus 0 804
ENSMUST00000172407 Psma4-002 protein_coding Mus_musculus 0 791
ENSMUST00000171578 Psma4-003 retained_intron Mus_musculus 0 726
ENSMUST00000153606 Gm6542-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000171900 Psma4-004 protein_coding Mus_musculus 0 638
ENSMUST00000169008 Psma4-006 retained_intron Mus_musculus 0 590
ENSMUST00000164679 Psma4-005 retained_intron Mus_musculus 0 359

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