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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | LIM domain and actin binding 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000172119  |
Lima1-004 |
ENSMUSG00000023022 |
10090 | - |
15:99781239-99783973  |
retained_intron |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PE | CIL_0008PE_0002 | VISTA | 15:99507076-100109694 |
| CIL_0008CC | CIL_0008CC_0002 | VISTA | 15:99507743-100109214 |
| CIL_0000LJ | CIL_0000LJ_0002 | CGP | 15:99734881-99875428 |
| CIL_00051T | CIL_00051T_0002 | CGP | 15:99778470-99967075 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000341247
|
LIMA1-003 | protein_coding | Homo_sapiens | 0 | 237 |
|
ENST00000394943
|
LIMA1-001 | protein_coding | Homo_sapiens | 0 | 237 |
|
ENST00000547825
|
LIMA1-007 | protein_coding | Homo_sapiens | 0 | 237 |
|
ENST00000549064
|
LIMA1-014 | retained_intron | Homo_sapiens | 0 | 244 |
|
ENST00000552338
|
LIMA1-015 | processed_transcript | Homo_sapiens | 0 | 228 |
|
ENST00000552491
|
LIMA1-017 | protein_coding | Homo_sapiens | 0 | 235 |
|
ENST00000552720
|
LIMA1-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 233 |
|
ENST00000552783
|
LIMA1-002 | protein_coding | Homo_sapiens | 0 | 237 |
|
ENST00000552823
|
LIMA1-006 | protein_coding | Homo_sapiens | 0 | 237 |
|
ENST00000552909
|
LIMA1-004 | protein_coding | Homo_sapiens | 0 | 235 |
