C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: LIM domain and actin binding 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172119 Lima1-004 ENSMUSG00000023022 10090 - 15:99781239-99783973 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0002 VISTA 15:99507076-100109694
CIL_0008CC CIL_0008CC_0002 VISTA 15:99507743-100109214
CIL_0000LJ CIL_0000LJ_0002 CGP 15:99734881-99875428
CIL_00051T CIL_00051T_0002 CGP 15:99778470-99967075

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341247 LIMA1-003 protein_coding Homo_sapiens 0 237
ENST00000394943 LIMA1-001 protein_coding Homo_sapiens 0 237
ENST00000547825 LIMA1-007 protein_coding Homo_sapiens 0 237
ENST00000549064 LIMA1-014 retained_intron Homo_sapiens 0 244
ENST00000552338 LIMA1-015 processed_transcript Homo_sapiens 0 228
ENST00000552491 LIMA1-017 protein_coding Homo_sapiens 0 235
ENST00000552720 LIMA1-005 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000552783 LIMA1-002 protein_coding Homo_sapiens 0 237
ENST00000552823 LIMA1-006 protein_coding Homo_sapiens 0 237
ENST00000552909 LIMA1-004 protein_coding Homo_sapiens 0 235

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