| Transcript ID | Brain | Heart | Muscle |
|---|---|---|---|
| ENST00000552909 | 1.255±0.00 | 0.514±0.00 | 0.440±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | LIM domain and actin binding 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000552909  |
LIMA1-004 |
ENSG00000050405 |
9606 | - |
12:50176885-50222356  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PE | CIL_0008PE_0001 | VISTA | 12:49905565-50507504 |
| CIL_0008CC | CIL_0008CC_0001 | VISTA | 12:49906068-50507455 |
| CIL_0000LJ | CIL_0000LJ_0001 | CGP | 12:50129306-50283546 |
| CIL_00051T | CIL_00051T_0001 | CGP | 12:50175788-50396622 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005737 | IDA | cytoplasm |
| GO:0005886 | IDA | plasma membrane |
| GO:0005925 | IDA | focal adhesion |
| GO:0008270 | IEA | zinc ion binding |
| GO:0015629 | IDA | actin cytoskeleton |
| GO:0030835 | IEA | negative regulation of actin filament depolymerization |
| GO:0051015 | IEA | actin filament binding |
| GO:0051017 | IEA | actin filament bundle assembly |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000073691
|
Lima1-001 | protein_coding | Mus_musculus | 0 | 1356 |
|
ENSMUST00000109024
|
Lima1-003 | protein_coding | Mus_musculus | 0 | 1356 |
|
ENSMUST00000172119
|
Lima1-004 | retained_intron | Mus_musculus | 0 | 235 |
