C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622611 RBM26-202 ENSG00000139746 9606 - 13:79318868-79406221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverLungMuscleOvaryENST00000622611
Transcript ID Brain Breast Kidney Liver Lung Muscle Ovary
ENST00000622611 1.870±0.00 1.140±0.00 1.273±0.00 0.360±0.00 1.134±0.00 0.970±0.00 1.412±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EJ CIL_0002EJ_0001 CGP 13:78614291-79406477
CIL_0002EH CIL_0002EH_0001 CGP 13:79311824-79556075

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0006397 IEA mRNA processing
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163545 Rbm26-006 protein_coding Mus_musculus 0 4591
ENSMUST00000022715 Rbm26-007 protein_coding Mus_musculus 0 4549
ENSMUST00000163499 Rbm26-002 protein_coding Mus_musculus 0 4218
ENSMUST00000100327 Rbm26-001 protein_coding Mus_musculus 0 2878
ENSMUST00000172122 Rbm26-004 protein_coding Mus_musculus 0 760
ENSDART00000114086 RBM26-202 protein_coding Danio_rerio 3e-35 156
ENSDART00000066084 RBM26-201 protein_coding Danio_rerio 3e-29 135

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