C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000062_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000066084-ENSG00000123268 CGP 9606 12:50504985-50821122
GeneTranscriptPositionBiotype
ENSG00000066084 (DIP2B)
DIP2 disco-interacting protein 2 homolog B (Drosophila) 		ENST00000301180 (DIP2B-002) 50505107-50748667 protein_coding
ENST00000546719 (DIP2B-004) 50640805-50680282 retained_intron
ENST00000546732 (DIP2B-001) 50685886-50745095 nonsense_mediated_decay
ENST00000549620 (DIP2B-003) 50504985-50680282 retained_intron
ENST00000552328 (DIP2B-005) 50685848-50686892 retained_intron
ENSG00000123268 (ATF1)
activating transcription factor 1 		ENST00000262053 (ATF1-001) 50764292-50821122 protein_coding
ENST00000549612 (ATF1-005) 50764078-50809475 nonsense_mediated_decay
ENST00000551831 (ATF1-002) 50764480-50820010 nonsense_mediated_decay
ENST00000552487 (ATF1-004) 50764509-50814368 protein_coding
ENST00000552510 (ATF1-003) 50763710-50814192 protein_coding
ENSG00000200183 (RNU6-238P)
RNA, U6 small nuclear 238, pseudogene 		ENST00000363313 (RNU6-238P-201) 50656973-50657078 snRNA
ENSG00000200428 (Y_RNA)
Y RNA 		ENST00000363558 (Y_RNA.1-349) 50743568-50743684 misc_RNA
ENSG00000207136 (RNU6-769P)
RNA, U6 small nuclear 769, pseudogene 		ENST00000384407 (RNU6-769P-201) 50633273-50633376 snRNA
ENSG00000271018 (RP11-60E8.2)
 ENST00000604279 (RP11-60E8.2-001) 50756892-50757433 processed_pseudogene
ENSG00000271490 (RP11-60E8.4)
 ENST00000603396 (RP11-60E8.4-001) 50806335-50806437 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_000062_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023026-ENSMUSG00000023027 CGP 10090 15:100038664-100261244
GeneTranscriptPositionBiotype
ENSMUSG00000023026 (Dip2b)
DIP2 disco-interacting protein 2 homolog B (Drosophila) 		ENSMUST00000023768 (Dip2b-002) 100154396-100215666 protein_coding
ENSMUST00000100203 (Dip2b-001) 100038664-100219473 protein_coding
ENSMUST00000108971 (Dip2b-201) 100154396-100219473 protein_coding
ENSMUST00000135658 (Dip2b-003) 100203136-100205629 processed_transcript
ENSMUSG00000023027 (Atf1)
activating transcription factor 1 		ENSMUST00000023769 (Atf1-001) 100227819-100261244 protein_coding
ENSMUST00000163855 (Atf1-006) 100227871-100254448 protein_coding
ENSMUST00000165804 (Atf1-004) 100232159-100252094 protein_coding
ENSMUST00000166435 (Atf1-009) 100254215-100259912 protein_coding
ENSMUST00000166809 (Atf1-007) 100232171-100233013 retained_intron
ENSMUST00000168103 (Atf1-003) 100232751-100260123 processed_transcript
ENSMUST00000169408 (Atf1-002) 100232733-100260080 nonsense_mediated_decay
ENSMUST00000171869 (Atf1-008) 100228263-100232814 protein_coding
ENSMUST00000172154 (Atf1-005) 100232198-100254384 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000062_0001ENSG00000066084ENST00000301180ENST00000546719ENST00000546732ENST00000549620ENST00000552328ENSG00000123268ENST00000262053ENST00000549612ENST00000551831ENST00000552487ENST00000552510ENSG00000200183ENST00000363313ENSG00000200428ENST00000363558ENSG00000207136ENST00000384407ENSG00000271018ENST00000604279ENSG00000271490ENST00000603396CIL_000062_0002ENSMUSG00000023026ENSMUST00000023768ENSMUST00000100203ENSMUST00000108971ENSMUST00000135658ENSMUSG00000023027ENSMUST00000023769ENSMUST00000163855ENSMUST00000165804ENSMUST00000166435ENSMUST00000166809ENSMUST00000168103ENSMUST00000169408ENSMUST00000171869ENSMUST00000172154
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000062_0001ENSG00000066084ENST00000301180ENST00000546732ENST00000549620ENSG00000123268ENST00000262053ENST00000549612ENST00000551831ENST00000552487ENST00000552510ENSG00000200183ENST00000363313ENSG00000200428ENST00000363558ENSG00000207136ENST00000384407ENSG00000271018ENST00000604279ENSG00000271490ENST00000603396CIL_000062_0002ENSMUSG00000023026ENSMUST00000023768ENSMUST00000100203ENSMUST00000108971ENSMUSG00000023027ENSMUST00000023769ENSMUST00000163855ENSMUST00000166435ENSMUST00000168103ENSMUST00000169408ENSMUST00000172154
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000066084 ENST00000301180 2.902±0.00 1.687±0.00 2.294±0.00 10.696±0.79 3.633±2.30 1.748±0.23 2.574±0.00 1.733±0.97 1.427±0.02 0.709±0.00 1.131±0.23 6.341±5.20 3.647±0.66 2.950±0.05
ENST00000546719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.189±0.00 2.126±0.00 3.187±0.00
ENST00000549620 N/A N/A N/A N/A N/A 2.429±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000123268 ENST00000262053 6.297±0.00 3.358±0.00 1.052±0.00 2.012±0.00 1.857±0.36 5.330±0.00 1.715±0.82 4.487±3.24 1.347±0.00 3.664±0.00 2.496±1.92 3.686±0.78 3.305±0.20 2.098±0.33
ENST00000549612 N/A N/A 2.714±0.00 1.664±0.00 6.018±0.00 4.702±0.00 N/A N/A 3.454±0.00 3.395±0.00 12.990±0.00 5.983±0.00 N/A N/A
ENST00000551831 N/A N/A 1.628±0.00 N/A 1.176±0.00 N/A 2.030±0.00 7.520±0.00 N/A N/A 1.575±0.00 N/A N/A N/A
ENST00000552487 N/A N/A N/A N/A 2.676±0.00 N/A N/A N/A 2.764±0.00 N/A N/A 8.047±0.00 N/A 3.810±0.00
ENST00000552510 N/A N/A N/A 1.984±0.00 N/A N/A N/A N/A 3.703±0.00 N/A N/A N/A N/A N/A
ENSG00000200183 ENST00000363313 N/A 0.407±0.00 N/A 0.207±0.00 0.598±0.00 0.566±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200428 ENST00000363558 N/A 0.338±0.00 N/A 0.426±0.00 N/A N/A N/A N/A N/A 0.619±0.00 N/A 0.984±0.00 N/A 1.031±0.09
ENSG00000207136 ENST00000384407 N/A N/A N/A 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271018 ENST00000604279 N/A N/A N/A 0.269±0.00 N/A N/A N/A 0.504±0.00 N/A N/A N/A N/A N/A 2.673±2.36
ENSG00000271490 ENST00000603396 N/A 0.210±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023026 ENSMUST00000023768 N/A N/A N/A 2.676±0.00 N/A N/A N/A N/A 0.359±0.00 1.833±0.00 N/A 2.017±0.61 3.555±1.29 8.087±0.64
ENSMUST00000100203 0.905±0.23 3.193±0.96 3.965±0.91 10.085±2.45 5.525±2.84 3.743±0.63 1.311±0.37 1.463±0.61 0.816±0.46 6.028±2.27 0.527±0.25 3.290±1.56 4.607±1.45 2.681±0.79
ENSMUST00000108971 1.067±0.11 1.778±0.06 1.667±0.00 3.467±1.26 0.987±0.12 1.486±0.21 N/A 0.615±0.16 0.513±0.17 2.448±0.80 0.307±0.08 2.019±0.91 1.557±0.66 1.398±0.62
ENSMUST00000135658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000023027 ENSMUST00000023769 9.073±4.11 21.288±3.89 14.212±1.66 4.260±2.11 7.298±4.79 10.030±2.10 6.835±1.08 8.507±3.85 16.892±10.93 13.249±3.17 13.025±0.73 13.751±3.31 13.433±6.25 13.495±5.84
ENSMUST00000163855 5.507±1.45 13.676±0.00 N/A N/A 4.336±0.18 N/A N/A N/A N/A N/A N/A 8.130±1.75 N/A N/A
ENSMUST00000165804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166435 N/A N/A N/A 20.969±0.00 N/A N/A N/A N/A N/A N/A N/A 119.494±0.00 91.576±1.10 110.057±0.00
ENSMUST00000166809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168103 6.473±1.15 14.856±4.46 N/A N/A 12.551±6.20 8.586±1.43 9.258±2.41 7.508±1.84 11.087±1.17 8.945±0.17 N/A 15.883±4.36 N/A 50.004±16.42
ENSMUST00000169408 N/A N/A N/A 3.396±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 15.467±1.40 17.348±0.00
ENSMUST00000171869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172154 N/A N/A N/A N/A 5.863±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 29.809±1.32

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