C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: regulatory factor X, 3 (influences HLA class II expression)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172498 Rfx3-006 ENSMUSG00000040929 10090 - 19:27768141-27836846 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartOvaryENSMUST00000172498
Transcript ID Heart Ovary
ENSMUST00000172498 0.192±0.00 1.228±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NH CIL_0000NH_0002 CGP 19:27388702-28011166
CIL_0009AI CIL_0009AI_0002 VISTA 19:27604248-28205597
CIL_0000F0 CIL_0000F0_0002 CGP 19:27761721-28680077

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302303 RFX3-201 protein_coding Homo_sapiens 0 957
ENST00000358730 RFX3-005 protein_coding Homo_sapiens 0 2095
ENST00000382004 RFX3-006 protein_coding Homo_sapiens 0 2758
ENST00000449234 RFX3-007 protein_coding Homo_sapiens 0 472
ENST00000458034 RFX3-008 protein_coding Homo_sapiens 0 942
ENST00000617270 RFX3-202 protein_coding Homo_sapiens 0 2758

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