C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: piggyBac transposable element derived 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172566 Pgbd5-003 ENSMUSG00000050751 10090 - 8:124369049-124439658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonPlacentaENSMUST00000172566
Transcript ID Colon Placenta
ENSMUST00000172566 1.206±0.00 0.065±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A0 CIL_0008A0_0002 VISTA 8:123980149-124582109
CIL_000612 CIL_000612_0002 CGP 8:124231391-124439658
CIL_0007WK CIL_0007WK_0002 VISTA 8:124343702-124945898
CIL_00060Z CIL_00060Z_0002 CGP 8:124369049-124552008

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000391860 PGBD5-001 protein_coding Homo_sapiens 0 1491
ENST00000525115 PGBD5-002 protein_coding Homo_sapiens 0 1495
ENST00000530424 PGBD5-003 processed_transcript Homo_sapiens 0 416

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