C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: H2A histone family, member Z
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173790 H2afz-007 ENSMUSG00000037894 10090 + 3:137864613-137866507 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainMusclePlacentaENSMUST00000173790
Transcript ID Bladder Brain Muscle Placenta
ENSMUST00000173790 97.565±0.00 40.964±0.00 24.505±3.71 110.195±77.28

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296417 H2AFZ-001 protein_coding Homo_sapiens 0 398
ENST00000394213 H2AFZP3-001 processed_pseudogene Homo_sapiens 0 326
ENST00000416034 H2AFZP1-001 processed_pseudogene Homo_sapiens 0 315
ENST00000511203 H2AFZ-003 retained_intron Homo_sapiens 0 241
ENST00000511319 H2AFZ-004 retained_intron Homo_sapiens 0 377
ENST00000511348 H2AFZ-002 retained_intron Homo_sapiens 2.8026e-45 187
ENST00000521867 RP11-152C15.1-001 processed_pseudogene Homo_sapiens 0 331
ENST00000527366 H2AFZ-006 retained_intron Homo_sapiens 0 357
ENST00000529158 H2AFZ-005 processed_transcript Homo_sapiens 0 375
ENST00000534148 H2AFZP4-001 processed_pseudogene Homo_sapiens 0 263

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