C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H2A histone family, member Z
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174561 H2afz-005 ENSMUSG00000037894 10090 + 3:137864573-137866818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENSMUST00000174561
Transcript ID Adrenal Brain Ovary Placenta Testis
ENSMUST00000174561 6.294±0.00 29.375±0.00 105.841±0.00 65.906±43.65 28.163±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296417 H2AFZ-001 protein_coding Homo_sapiens 0 813
ENST00000394213 H2AFZP3-001 processed_pseudogene Homo_sapiens 0 272
ENST00000416034 H2AFZP1-001 processed_pseudogene Homo_sapiens 0 259
ENST00000511203 H2AFZ-003 retained_intron Homo_sapiens 0 725
ENST00000511319 H2AFZ-004 retained_intron Homo_sapiens 0 765
ENST00000511348 H2AFZ-002 retained_intron Homo_sapiens 0 725
ENST00000521867 RP11-152C15.1-001 processed_pseudogene Homo_sapiens 0 278
ENST00000527366 H2AFZ-006 retained_intron Homo_sapiens 0 298
ENST00000529158 H2AFZ-005 processed_transcript Homo_sapiens 0 680
ENST00000534148 H2AFZP4-001 processed_pseudogene Homo_sapiens 0 215

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