C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO/sentrin specific peptidase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000175999 Senp6-007 ENSMUSG00000034252 10090 + 9:80067099-80144781 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLungMuscleENSMUST00000175999
Transcript ID Kidney Lung Muscle
ENSMUST00000175999 0.872±0.00 1.405±0.00 1.561±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PT CIL_0006PT_0002 CGP 9:79815051-80144953
CIL_0006PS CIL_0006PS_0002 CGP 9:80066903-80311729

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327284 SENP6-010 protein_coding Homo_sapiens 0 1306
ENST00000370010 SENP6-002 protein_coding Homo_sapiens 0 2684
ENST00000424947 SENP6-007 protein_coding Homo_sapiens 0 1306
ENST00000447266 SENP6-004 protein_coding Homo_sapiens 0 2684
ENST00000474906 SENP6-009 retained_intron Homo_sapiens 0 520
ENST00000476060 SENP6-008 retained_intron Homo_sapiens 0 315
ENST00000483859 SENP6-003 protein_coding Homo_sapiens 0 427
ENST00000487548 SENP6-005 retained_intron Homo_sapiens 2e-37 159
ENST00000493959 SENP6-001 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000503501 SENP6-011 nonsense_mediated_decay Homo_sapiens 0 1267

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