C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metastasis associated 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176054 Mta3-008 ENSMUSG00000055817 10090 + 17:83784334-83820216 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TA CIL_0003TA_0003 CGP 17:83585957-83821516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0008278 IDA cohesin complex
GO:0008284 IMP positive regulation of cell proliferation
GO:0010971 IMP positive regulation of G2/M transition of mitotic cell cycle
GO:0016581 IDA NuRD complex
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000405094 MTA3-017 protein_coding Homo_sapiens 0 907
ENST00000405592 MTA3-005 protein_coding Homo_sapiens 0 922
ENST00000406652 MTA3-001 protein_coding Homo_sapiens 0 922
ENST00000406911 MTA3-003 protein_coding Homo_sapiens 0 558
ENST00000407270 MTA3-002 protein_coding Homo_sapiens 0 555
ENST00000409019 MTA3-018 nonsense_mediated_decay Homo_sapiens 0 878
ENST00000454356 MTA3-004 nonsense_mediated_decay Homo_sapiens 0 512
ENST00000467925 MTA3-006 retained_intron Homo_sapiens 0 425
ENST00000472767 MTA3-014 processed_transcript Homo_sapiens 0 555
ENST00000475383 MTA3-015 processed_transcript Homo_sapiens 0 448
ENST00000478602 MTA3-016 retained_intron Homo_sapiens 0 357
ENST00000482875 MTA3-007 retained_intron Homo_sapiens 0 555

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