C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metastasis associated 1 family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405592 MTA3-005 ENSG00000057935 9606 + 2:42494569-42756947 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLungOvaryTestisENST00000405592
Transcript ID Adrenal Brain Lung Ovary Testis
ENST00000405592 0.503±0.00 3.279±0.69 0.867±0.00 0.925±0.00 1.831±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TA CIL_0003TA_0002 CGP 2:42442017-42756947
CIL_0003T7 CIL_0003T7_0002 CGP 2:42494569-42764261

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0008278 IEA cohesin complex
GO:0008284 IEA positive regulation of cell proliferation
GO:0010971 IEA positive regulation of G2/M transition of mitotic cell cycle
GO:0016581 IEA NuRD complex
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112352 Mta3-004 protein_coding Mus_musculus 0 1910
ENSMUST00000067826 Mta3-001 protein_coding Mus_musculus 0 1892
ENSMUST00000177069 Mta3-003 nonsense_mediated_decay Mus_musculus 0 1842
ENSMUST00000112350 Mta3-002 protein_coding Mus_musculus 0 1594
ENSMUST00000112349 Mta3-005 protein_coding Mus_musculus 0 1581
ENSMUST00000176054 Mta3-008 protein_coding Mus_musculus 0 922
ENSMUST00000176816 Mta3-007 protein_coding Mus_musculus 0 691
ENSMUST00000175920 Mta3-009 processed_transcript Mus_musculus 0 316

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