C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thymine DNA glycosylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176195 Tdg-010 ENSMUSG00000034674 10090 + 10:82641440-82648879 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000176195
Transcript ID Placenta
ENSMUST00000176195 6.227±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000002 CIL_000002_0003 CGP 10:82619851-82650799
CIL_0002S6 CIL_0002S6_0002 CGP 10:82629828-82690650

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266775 TDG-003 protein_coding Homo_sapiens 0 569
ENST00000392872 TDG-001 protein_coding Homo_sapiens 0 590
ENST00000537100 TDG-008 protein_coding Homo_sapiens 2e-35 154
ENST00000540956 TDG-006 nonsense_mediated_decay Homo_sapiens 0 917
ENST00000542926 TDG-009 retained_intron Homo_sapiens 0 508
ENST00000543961 TDGP1-001 processed_pseudogene Homo_sapiens 0 472
ENST00000544861 TDG-004 protein_coding Homo_sapiens 0 569

Loading