C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000176475  |
Smarca2-009 |
ENSMUSG00000024921 |
10090 | + |
19:26748459-26777370  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000643 | CIL_000643_0003 | CGP | 19:25672420-26778321 |
| CIL_0007PU | CIL_0007PU_0002 | VISTA | 19:26544388-27147098 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0006325 | TAS | chromatin organization |
| GO:0006334 | TAS | nucleosome assembly |
| GO:0008285 | IMP | negative regulation of cell proliferation |
| GO:0016514 | TAS | SWI/SNF complex |
| GO:0035887 | IMP | aortic smooth muscle cell differentiation |
| GO:0071564 | IDA | npBAF complex |
| GO:0071565 | IDA | nBAF complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000302401
|
SMARCA2-001 | protein_coding | Homo_sapiens | 0 | 1110 |
|
ENST00000324954
|
SMARCA2-201 | protein_coding | Homo_sapiens | 0 | 946 |
|
ENST00000349721
|
SMARCA2-202 | protein_coding | Homo_sapiens | 0 | 652 |
|
ENST00000357248
|
SMARCA2-203 | protein_coding | Homo_sapiens | 0 | 950 |
|
ENST00000382183
|
SMARCA2-013 | protein_coding | Homo_sapiens | 0 | 948 |
|
ENST00000382185
|
SMARCA2-009 | protein_coding | Homo_sapiens | 0 | 946 |
|
ENST00000382186
|
SMARCA2-010 | protein_coding | Homo_sapiens | 0 | 652 |
|
ENST00000382194
|
SMARCA2-004 | protein_coding | Homo_sapiens | 0 | 950 |
|
ENST00000382203
|
SMARCA2-003 | protein_coding | Homo_sapiens | 0 | 652 |
|
ENST00000416751
|
SMARCA2-015 | protein_coding | Homo_sapiens | 0 | 776 |
|
ENST00000417599
|
SMARCA2-012 | protein_coding | Homo_sapiens | 0 | 1086 |
|
ENST00000423555
|
SMARCA2-014 | protein_coding | Homo_sapiens | 0 | 686 |
|
ENST00000452193
|
SMARCA2-011 | protein_coding | Homo_sapiens | 0 | 390 |
