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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000302401  |
SMARCA2-001 |
ENSG00000080503 |
9606 | + |
9:2158456-2193621  |
protein_coding |
|
Genome Exciting message Genes Connecting Transcripts Connecting Powered by Dalliance 0.11.11 |
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000643 | CIL_000643_0002 | CGP | 9:1050354-2193624 |
| CIL_0007PU | CIL_0007PU_0001 | VISTA | 9:1940936-2542833 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000176475
|
Smarca2-009 | protein_coding | Mus_musculus | 0 | 1110 |
|
ENSMUST00000112637
|
Smarca2-007 | protein_coding | Mus_musculus | 0 | 1042 |
|
ENSMUST00000025862
|
Smarca2-001 | protein_coding | Mus_musculus | 0 | 1040 |
|
ENSMUST00000176769
|
Smarca2-005 | protein_coding | Mus_musculus | 0 | 944 |
|
ENSMUST00000177252
|
Smarca2-016 | protein_coding | Mus_musculus | 0 | 924 |
|
ENSMUST00000176030
|
Smarca2-003 | protein_coding | Mus_musculus | 0 | 745 |
|
ENSMUST00000177116
|
Smarca2-018 | protein_coding | Mus_musculus | 0 | 743 |
|
ENSMUST00000176731
|
Smarca2-006 | nonsense_mediated_decay | Mus_musculus | 0 | 669 |
|
ENSMUST00000175791
|
Smarca2-010 | protein_coding | Mus_musculus | 0 | 660 |
|
ENSMUST00000176698
|
Smarca2-011 | protein_coding | Mus_musculus | 0 | 649 |
|
ENSMUST00000177484
|
Smarca2-014 | protein_coding | Mus_musculus | 0 | 647 |
|
ENSMUST00000099537
|
Smarca2-002 | nonsense_mediated_decay | Mus_musculus | 0 | 621 |
|
ENSMUST00000176700
|
Smarca2-019 | retained_intron | Mus_musculus | 0 | 595 |
|
ENSMUST00000175842
|
Smarca2-015 | protein_coding | Mus_musculus | 0 | 479 |
|
ENSMUST00000175953
|
Smarca2-017 | protein_coding | Mus_musculus | 0 | 398 |
|
ENSMUST00000176494
|
Smarca2-008 | processed_transcript | Mus_musculus | 0 | 211 |
|
ENSMUST00000175935
|
Smarca2-004 | processed_transcript | Mus_musculus | 2e-37 | 161 |
