C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO/sentrin specific peptidase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176607 Senp6-004 ENSMUSG00000034252 10090 + 9:80103172-80143712 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeOvaryENSMUST00000176607
Transcript ID Adipose Ovary
ENSMUST00000176607 1.554±0.00 3.256±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PT CIL_0006PT_0002 CGP 9:79815051-80144953
CIL_0006PS CIL_0006PS_0002 CGP 9:80066903-80311729

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327284 SENP6-010 protein_coding Homo_sapiens 0 1306
ENST00000370010 SENP6-002 protein_coding Homo_sapiens 0 2601
ENST00000424947 SENP6-007 protein_coding Homo_sapiens 0 1306
ENST00000447266 SENP6-004 protein_coding Homo_sapiens 0 2601
ENST00000474906 SENP6-009 retained_intron Homo_sapiens 0 520
ENST00000476060 SENP6-008 retained_intron Homo_sapiens 0 315
ENST00000503501 SENP6-011 nonsense_mediated_decay Homo_sapiens 0 1267

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