C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily c, polypeptide 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176624 Cyp2c29-003 ENSMUSG00000003053 10090 + 19:39269405-39330648 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverLungOvaryTestisENSMUST00000176624
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Lung Ovary Testis
ENSMUST00000176624 0.020±0.00 0.387±0.00 0.012±0.00 0.093±0.04 0.045±0.02 0.061±0.02 0.258±0.00 0.380±0.26 0.324±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H6 CIL_0007H6_000S CGP 19:39113898-39330713
CIL_0007H6 CIL_0007H6_000B CGP 19:39269405-39463075

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004497 IEA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260682 CYP2C9-001 protein_coding Homo_sapiens 0 1033
ENST00000285979 CYP2C18-001 protein_coding Homo_sapiens 0 1059
ENST00000339022 CYP2C18-002 protein_coding Homo_sapiens 0 571
ENST00000371270 CYP2C8-001 protein_coding Homo_sapiens 0 798
ENST00000371321 CYP2C19-001 protein_coding Homo_sapiens 0 974
ENST00000464755 RP11-400G3.5-001 nonsense_mediated_decay Homo_sapiens 0 1088
ENST00000479946 CYP2C8-002 retained_intron Homo_sapiens 0 510
ENST00000490994 CYP2C8-008 nonsense_mediated_decay Homo_sapiens 0 800
ENST00000525991 CYP2C8-007 nonsense_mediated_decay Homo_sapiens 0 715
ENST00000526814 CYP2C8-005 retained_intron Homo_sapiens 0 715
ENST00000527420 CYP2C8-003 nonsense_mediated_decay Homo_sapiens 0 593
ENST00000527953 CYP2C8-006 retained_intron Homo_sapiens 0 510
ENST00000531714 CYP2C8-011 retained_intron Homo_sapiens 0 198
ENST00000533320 CYP2C8-004 retained_intron Homo_sapiens 0 715
ENST00000535898 CYP2C8-201 protein_coding Homo_sapiens 0 715
ENST00000539050 CYP2C8-202 protein_coding Homo_sapiens 0 800
ENST00000623108 CYP2C8-203 protein_coding Homo_sapiens 0 800

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