C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane protein 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178558 Tmem40-205 ENSMUSG00000059900 10090 - 6:115729141-115735103 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungENSMUST00000178558
Transcript ID Brain Lung
ENSMUST00000178558 0.068±0.00 0.242±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SC CIL_0005SC_0002 CGP 6:115618067-115762466
CIL_0005SD CIL_0005SD_0002 CGP 6:115729131-115804893

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264728 TMEM40-004 protein_coding Homo_sapiens 0 394
ENST00000314124 TMEM40-001 protein_coding Homo_sapiens 0 396
ENST00000435218 TMEM40-003 protein_coding Homo_sapiens 0 396
ENST00000435575 TMEM40-002 protein_coding Homo_sapiens 0 396
ENST00000476331 TMEM40-007 processed_transcript Homo_sapiens 0 394
ENST00000480698 TMEM40-005 retained_intron Homo_sapiens 0 353
ENST00000485124 TMEM40-008 retained_intron Homo_sapiens 3e-32 143

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